PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15767

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 409aa MW: 46636.5 Da PI: 9.1279

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15767	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.6	1e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H+r H OIW15767 6 FVCEICKKGFQRDQNLQLHLRGH 28 89*******************98 PP
2	zf-C2H2	12.2	0.00057	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + OIW15767 83 WKCNKCSKKYAVQSDWKAHSKIC 105 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MATNRFVCEI CKKGFQRDQN LQLHLRGHNL PWKLKQRNKQ EVIKKKVYVC PEKSCVHHDP 60 FRALGDLTGI KKHYSRKHGE KKWKCNKCSK KYAVQSDWKA HSKICGTKEY KCECGTTFSR 120 RDGFITHRAF CGALAEQSAR LITSVPSVFN FRNDQAPRIP HSLPGFHQEF SGQGSEPLIG 180 NFVDSEHALK LRLPLWLDQT NSNVYSSNEV VQTMNMNMNM NMSGSSQQAQ WLSYKYPEAS 240 FPAAMSQGLK QEEEGENKGN FSHHHHSLSS SLYSSAQNLQ GGPTHMSTRI NDNAIFNNNS 300 NNVFGLNNNI VEMQKVFKQG NQEGQNFNNM VVSSSLNDAN CTSFGNLDHM VMPTVDEDQL 360 GLTRDFLGVG DETLRTPFLQ HQQQLHNFNP IHSVLNLHSH FNRHHNMMK

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MATNRFVCEI CKKGFQRDQN LQLHLRGHNL PWKLKQRNKQ EVIKKKVYVC PEKSCVHHDP  60
FRALGDLTGI KKHYSRKHGE KKWKCNKCSK KYAVQSDWKA HSKICGTKEY KCECGTTFSR  120
RDGFITHRAF CGALAEQSAR LITSVPSVFN FRNDQAPRIP HSLPGFHQEF SGQGSEPLIG  180
NFVDSEHALK LRLPLWLDQT NSNVYSSNEV VQTMNMNMNM NMSGSSQQAQ WLSYKYPEAS  240
FPAAMSQGLK QEEEGENKGN FSHHHHSLSS SLYSSAQNLQ GGPTHMSTRI NDNAIFNNNS  300
NNVFGLNNNI VEMQKVFKQG NQEGQNFNNM VVSSSLNDAN CTSFGNLDHM VMPTVDEDQL  360
GLTRDFLGVG DETLRTPFLQ HQQQLHNFNP IHSVLNLHSH FNRHHNMMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	2e-78	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW15767