PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15853

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 420aa MW: 48371.3 Da PI: 4.2012

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15853	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.6	3.9e-14	190	274	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+l+L+++ + + ++++l+ W+ev++k+ + ++er+ +qC++ ++ l+k+y+k+k ++ ++ s+++yf++++ OIW15853 190 WTEHETLVLLDVWADWFLQCGSKSLQLEEWQEVAEKVsKVSKIERTGTQCRHHLNTLKKKYEKEKVKFREM-DDGASKWVYFKRMD 274 ***********************************666789********************9997.666679*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MDDIEDDDTM YPPNPYRVSH LHQGYEYMSR RKPTSRVSPF NELVGNEYGE DNNNSNEGEE 60 EVQEEEERLG EEEDDEDDID QANNIQPSDK DIDDNEEEEE EEEEEDDANG GGDENCDDSD 120 DGEDDDDYDD DDKHKSYIVE IDNDVECQPK KQKLKSLIST YELAPHVPAP SAAAPSVSKP 180 YFGRNSVNDW TEHETLVLLD VWADWFLQCG SKSLQLEEWQ EVAEKVSKVS KIERTGTQCR 240 HHLNTLKKKY EKEKVKFREM DDGASKWVYF KRMDELMSSS PQQAGLCCGL NSGEYVPANA 300 RIYSNRTNGL DETRSSPRST KPIAEEGSDR PHAKRGRKGR GSGEASSFRL LADSLHKFSN 360 VYEKIENDRR QQMVELEKMR MDFQKEIETE RRQILERLQS EISKLEQIDD ENDGSSEKGM

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MDDIEDDDTM YPPNPYRVSH LHQGYEYMSR RKPTSRVSPF NELVGNEYGE DNNNSNEGEE  60
EVQEEEERLG EEEDDEDDID QANNIQPSDK DIDDNEEEEE EEEEEDDANG GGDENCDDSD  120
DGEDDDDYDD DDKHKSYIVE IDNDVECQPK KQKLKSLIST YELAPHVPAP SAAAPSVSKP  180
YFGRNSVNDW TEHETLVLLD VWADWFLQCG SKSLQLEEWQ EVAEKVSKVS KIERTGTQCR  240
HHLNTLKKKY EKEKVKFREM DDGASKWVYF KRMDELMSSS PQQAGLCCGL NSGEYVPANA  300
RIYSNRTNGL DETRSSPRST KPIAEEGSDR PHAKRGRKGR GSGEASSFRL LADSLHKFSN  360
VYEKIENDRR QQMVELEKMR MDFQKEIETE RRQILERLQS EISKLEQIDD ENDGSSEKGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-54	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW15853