PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15949

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 328aa MW: 36396.6 Da PI: 8.5005

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15949	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0016	192	214	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F ++ L H +H OIW15949 192 FVCSSCNKVFGSHQALGGHRASH 214 89************999999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MKNSDSNDYD DYVYNMADQN HPPSSSMVID AVAGSSSSSS YHRSHPRKKR TTMMTMLHDN 60 NNNNNSNNNN NIVKTNKYGG GGVGKKQADT GAPKITPPCT ECGKKFWSWK ALFGHMRCHP 120 ERQWRGINPP PNITPRQPQI LTDEDHEVAA SLLLLAKGKG KVVVKEDSTM VNMNYGILSP 180 NLSLVSSQDE RFVCSSCNKV FGSHQALGGH RASHKNVKGC FAINVGEDHM NIIHNNHSHS 240 HIGGGATSNN DNDQQQQQQH QQHMDGEGHK CSICLRVFST GQALGGHKRC HWENKPTTNN 300 VLALPLDLNF PPQEQEQPPL NLDLRLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	2e-60	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW15949