PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW16064

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 418aa MW: 47416.8 Da PI: 9.5551

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16064	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.6	1.2e-06	58	80	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C+k F r nL+ H r+H OIW16064 58 YVCEICNKGFQRDQNLQMHRRRH 80 9*********************9 PP
2	zf-C2H2	14.8	8.3e-05	135	157	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k + +s++k H++t+ OIW16064 135 WVCERCTKGYAVQSDYKAHLKTC 157 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MFANNLSTLS LPISDPSFSC LENGTSINKR KRRPTGTPDP DAEVVSLSPK SLLESDSYVC 60 EICNKGFQRD QNLQMHRRRH KVPWKLLKRE TSMVKKRVFV CPESSCLHHD PCHALGDLVG 120 IKKHFRRKHS NHKQWVCERC TKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ 180 EACNMGMLRT EPHHQQLQLH QQQPMCLSRT ASSPSPSNET NFRTCPNLPK PTTDPSFFNM 240 NPTSSTIATN TETSLSRKNN KLYPNLDLQL STNTNTNTSN TYTIVVVAAS LTPNKKEDHH 300 QKQSTRLQLS IGSSHNNEKN DQPNRNNNII NEKEGMALLR VAMAEKVYAE EARKQAKKQI 360 EVAEQEFTSA KRIRQQAEVE VEKAYALKEH SMKQINSTML QITCHACKQS FKVLGTAI

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MFANNLSTLS LPISDPSFSC LENGTSINKR KRRPTGTPDP DAEVVSLSPK SLLESDSYVC  60
EICNKGFQRD QNLQMHRRRH KVPWKLLKRE TSMVKKRVFV CPESSCLHHD PCHALGDLVG  120
IKKHFRRKHS NHKQWVCERC TKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ  180
EACNMGMLRT EPHHQQLQLH QQQPMCLSRT ASSPSPSNET NFRTCPNLPK PTTDPSFFNM  240
NPTSSTIATN TETSLSRKNN KLYPNLDLQL STNTNTNTSN TYTIVVVAAS LTPNKKEDHH  300
QKQSTRLQLS IGSSHNNEKN DQPNRNNNII NEKEGMALLR VAMAEKVYAE EARKQAKKQI  360
EVAEQEFTSA KRIRQQAEVE VEKAYALKEH SMKQINSTML QITCHACKQS FKVLGTAI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	34	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-140	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW16064