PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW16645
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 226aa    MW: 25564.2 Da    PI: 8.5894
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW16645genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF47.91.7e-152872347
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
              +e + +  vtfsk + g++ K  ELS+LC+ae a+ii s++gkly
  OIW16645 28 VEHNNKDDVTFSKHKLGLFNKVTELSILCQAETALIISSQQGKLY 72
              67778899************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MESSSKAKIG TKPTTTKGRK RKFEIKNVEH NNKDDVTFSK HKLGLFNKVT ELSILCQAET  60
ALIISSQQGK LYVCGCPDPD AVIRRILNDG SLVQSCHAGK KTHQELVETM NLEYEATHDR  120
LKEEKKSLAE IQETRKGRLD FPPWWNQDIE KMGLEDLEHF TASLETLKLN LVATLEAKKL  180
NSQRLMYSNL PPVNGCFSGD RQVWNLMNGC SSSRNPMVPN LGFGHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-21M-type_MADS family protein