PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW16694

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 222aa MW: 24442.8 Da PI: 7.341

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16694	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	90.7	1.8e-28	4	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C++lr++C++dC+++p++ p++q++++ +++k++G++ +l+l++a+p+ r+ +++sl+yeA+ r+ +Pv G++g+++++++ +q++++++l OIW16694 4 SCNGCRILRKGCSDDCIIRPCLewinsPQSQANATLFLAKFYGRAGLLNLINAAPQPLRPGVFKSLMYEACGRIVNPVCGSLGLLWTGEWAHCQAAVDAVL 104 6***********************************************************************************************99998 PP DUF260 97 lkee 100 ++e OIW16694 105 NGSE 108 7765 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MRLSCNGCRI LRKGCSDDCI IRPCLEWINS PQSQANATLF LAKFYGRAGL LNLINAAPQP 60 LRPGVFKSLM YEACGRIVNP VCGSLGLLWT GEWAHCQAAV DAVLNGSEIS AVELSDWQVT 120 PGIKHVFPAH DIRHVSRDTH VDQLRGERPR FRGTGNVIKP KAQVGSVDSA RLWKLGSGLT 180 QEQGNKEGWE TESEETVEAS LMSRDEPSRT GENKVCWELT LG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68510.1	4e-65	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW16694