PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW16746

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 411aa MW: 47144.2 Da PI: 4.9109

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16746	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	2.9e-12	206	257	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ OIW16746 206 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 257 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MPPSFNTLEY SLDNQNHNHF YPQQQQMKFR IGETSSENNN LMVDYMPQQQ PPPQISPSGF 60 YGATSFDKLS FADVMQFADF GPKLALNQAK NCEETGIDPI CFLKFPVLND KKLMVNNIEA 120 GDEEAQNDDE RFNMMSMEDK SRVGASAEEE MIRQDEETWV SDDNNSMQIR FLGHEELQNR 180 NSTVKENKNK RKRPRTEKTS EEVESQRMTH IAVERNRRKQ MNEHLRVLRS LMPGSYVQRG 240 DQASIIGGAI EFVRELEQLL QCLESQKRRR ILGEAQSRQV GDPYLETQQP IQPPFCPTLP 300 NDQMKLVELE TGIREETVEN KSCLADVEVK LLGFDAIIKI LSRRRPGQLI KTIAALEDLQ 360 LIILHTNITT IDQTVLYSFN VKVASDSRFT AEDIASSIQQ IFSFIHANTS M

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MPPSFNTLEY SLDNQNHNHF YPQQQQMKFR IGETSSENNN LMVDYMPQQQ PPPQISPSGF  60
YGATSFDKLS FADVMQFADF GPKLALNQAK NCEETGIDPI CFLKFPVLND KKLMVNNIEA  120
GDEEAQNDDE RFNMMSMEDK SRVGASAEEE MIRQDEETWV SDDNNSMQIR FLGHEELQNR  180
NSTVKENKNK RKRPRTEKTS EEVESQRMTH IAVERNRRKQ MNEHLRVLRS LMPGSYVQRG  240
DQASIIGGAI EFVRELEQLL QCLESQKRRR ILGEAQSRQV GDPYLETQQP IQPPFCPTLP  300
NDQMKLVELE TGIREETVEN KSCLADVEVK LLGFDAIIKI LSRRRPGQLI KTIAALEDLQ  360
LIILHTNITT IDQTVLYSFN VKVASDSRFT AEDIASSIQQ IFSFIHANTS M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	218	RMTHIAVERNRR
2	267	271	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-131	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW16746