PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW16837

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 478aa MW: 53775.7 Da PI: 6.5042

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16837	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.2	1.8e-41	189	266	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv gC++dls+ keyh+rhkvC+vhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCrrrL++hnerrrk+q OIW16837 189 VCQVYGCNVDLSSSKEYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLEGHNERRRKQQF 266 6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MESWSCVEEE KGYLFSDEMD FSLDAFMRSR KALVEWDNKG PCNFEGDGFA SDREIVWEFV 60 AKEGQQSMEF VDLGFPDLFR KSFNSGQAHE ISTCDLDSNS SKRGNSSTHV IALVSSLGEE 120 VSESKHLRSL VESKTHGSSL IDLKLGSLAD YRGASNDEIA EEGFTLSSMH PTMLTKRART 180 SSSPIQAPVC QVYGCNVDLS SSKEYHKRHK VCDVHSKTAK VIVNGIEQRF CQQCSRFHLL 240 AEFDDGKRSC RRRLEGHNER RRKQQFDYMS SKQHKIHQSF QGTDYLGSSL QKRSQFPFQD 300 IFRSGIILSG KYDQISHSGH VKLEHESIYS SQEALALKHG QELSGCALSL LSAQSQNPPR 360 HSTGNLSPSS LIFQSTCLQN RDDQVSETPS GINSVDKYVP TESFRCGMNS KEDITSGSSI 420 LSNDYCQPSA SCNVKYRPSY EHGTTVDLFQ LSSNLQRVEQ QRNGLIKWEN DDFCFPTV

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MESWSCVEEE KGYLFSDEMD FSLDAFMRSR KALVEWDNKG PCNFEGDGFA SDREIVWEFV  60
AKEGQQSMEF VDLGFPDLFR KSFNSGQAHE ISTCDLDSNS SKRGNSSTHV IALVSSLGEE  120
VSESKHLRSL VESKTHGSSL IDLKLGSLAD YRGASNDEIA EEGFTLSSMH PTMLTKRART  180
SSSPIQAPVC QVYGCNVDLS SSKEYHKRHK VCDVHSKTAK VIVNGIEQRF CQQCSRFHLL  240
AEFDDGKRSC RRRLEGHNER RRKQQFDYMS SKQHKIHQSF QGTDYLGSSL QKRSQFPFQD  300
IFRSGIILSG KYDQISHSGH VKLEHESIYS SQEALALKHG QELSGCALSL LSAQSQNPPR  360
HSTGNLSPSS LIFQSTCLQN RDDQVSETPS GINSVDKYVP TESFRCGMNS KEDITSGSSI  420
LSNDYCQPSA SCNVKYRPSY EHGTTVDLFQ LSSNLQRVEQ QRNGLIKWEN DDFCFPTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	2e-46	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW16837