PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW16877

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 417aa MW: 47169.1 Da PI: 6.7909

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16877	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.7	8.7e-08	331	371	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L+ ++P K++ a++L +A +Y+k L OIW16877 331 ARQRRERISEKIRVLQNMVPGG-----SKMDTASMLDEAANYLKFL 371 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MDNMGWNTSQ LEPNTPMMLS TQQQNLEGCY NVSNLSSSFH NQIQEMQKAQ TEHKYPNSEK 60 LIYESEAATT SKVMNEMQNT NLSQHAATMR VKLGGGTSLR EGLTSQSFHS FAVNNYMQDF 120 NMAYNYNHYQ QQQFIINGTQ NGKSLDSFDY LFSASNSNTE TSMEDADCKN IWNNFNYSSA 180 ASSGEVSESN SSNDGRNKNM HCPINELDET LSQTSSDQHI NQVNTLESNK TNCSNYMFKA 240 GSNFRLISQN PQKSKKPRWE NSPYSSNINF QQPNSSASSC IEEHDPEAIA QMKEMIYRAA 300 AFRPVNLGLE NVEKPKRKNV RISNDPQTVA ARQRRERISE KIRVLQNMVP GGSKMDTASM 360 LDEAANYLKF LRSQVKALEN LGNKVGSMNY PHNTIAFSFN PSFPMQTPLT YPSRFEA

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MDNMGWNTSQ LEPNTPMMLS TQQQNLEGCY NVSNLSSSFH NQIQEMQKAQ TEHKYPNSEK  60
LIYESEAATT SKVMNEMQNT NLSQHAATMR VKLGGGTSLR EGLTSQSFHS FAVNNYMQDF  120
NMAYNYNHYQ QQQFIINGTQ NGKSLDSFDY LFSASNSNTE TSMEDADCKN IWNNFNYSSA  180
ASSGEVSESN SSNDGRNKNM HCPINELDET LSQTSSDQHI NQVNTLESNK TNCSNYMFKA  240
GSNFRLISQN PQKSKKPRWE NSPYSSNINF QQPNSSASSC IEEHDPEAIA QMKEMIYRAA  300
AFRPVNLGLE NVEKPKRKNV RISNDPQTVA ARQRRERISE KIRVLQNMVP GGSKMDTASM  360
LDEAANYLKF LRSQVKALEN LGNKVGSMNY PHNTIAFSFN PSFPMQTPLT YPSRFEA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	332	337	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	4e-68	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW16877