PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW16914

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 421aa MW: 48085.7 Da PI: 7.6018

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16914	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.9	8.7e-06	66	87	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg sF+ + +L +H+++H OIW16914 66 TCEECGASFKKHAYLLQHMQSH 87 6*******************99 PP
2	zf-C2H2	16.2	3e-05	93	117	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ +C s++rk++L+rH+ H OIW16914 93 YVCTfdNCQASYRRKDHLTRHLAQH 117 99*******************9887 PP
3	zf-C2H2	14.6	9.4e-05	122	147	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C+ Fs +sn+krH + H OIW16914 122 FKCPiqNCNLLFSLQSNMKRHVKEmH 147 89********************9988 PP
4	zf-C2H2	21.3	7.2e-07	162	186	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+Cp Cgk+F+ s L++H +H OIW16914 162 YVCPevGCGKVFKYASKLRKHEDSH 186 9********************9888 PP
5	zf-C2H2	17	1.7e-05	252	277	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kC dC+ sFs+ksnL++H + H OIW16914 252 FKCVqkDCDCSFSSKSNLHKHEKAvH 277 899999***************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MDEESVGSEE LPVFSDIRRY YCQYCGICRS KKTLITSHIN LHHKDMEDAK DEKDNDGGDG 60 LKSNNTCEEC GASFKKHAYL LQHMQSHLVE RPYVCTFDNC QASYRRKDHL TRHLAQHEGK 120 TFKCPIQNCN LLFSLQSNMK RHVKEMHNES STSTSAEGQK QYVCPEVGCG KVFKYASKLR 180 KHEDSHVKLE SVEVLCLEPG CMKHFTNPKC LKEHINSCHL YTTCDICGTE QLKKNMKRHL 240 RMHEADNSSE VFKCVQKDCD CSFSSKSNLH KHEKAVHFKD KPYVCGFSDC GMRFAYKHVR 300 DKHEKTGKHV FTLGDFEEAD AEFRSRPRGG RKRVCPSVEI RDIILYLELG AWSLELGAWS 360 LELGAWSLEL GAWSLELGAW SLELGAWSLE LGAWSLELGA WSLELGVVSF HCLALKKSSS 420 K

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MDEESVGSEE LPVFSDIRRY YCQYCGICRS KKTLITSHIN LHHKDMEDAK DEKDNDGGDG  60
LKSNNTCEEC GASFKKHAYL LQHMQSHLVE RPYVCTFDNC QASYRRKDHL TRHLAQHEGK  120
TFKCPIQNCN LLFSLQSNMK RHVKEMHNES STSTSAEGQK QYVCPEVGCG KVFKYASKLR  180
KHEDSHVKLE SVEVLCLEPG CMKHFTNPKC LKEHINSCHL YTTCDICGTE QLKKNMKRHL  240
RMHEADNSSE VFKCVQKDCD CSFSSKSNLH KHEKAVHFKD KPYVCGFSDC GMRFAYKHVR  300
DKHEKTGKHV FTLGDFEEAD AEFRSRPRGG RKRVCPSVEI RDIILYLELG AWSLELGAWS  360
LELGAWSLEL GAWSLELGAW SLELGAWSLE LGAWSLELGA WSLELGVVSF HCLALKKSSS  420
K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	238	LKKNMKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-127	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW16914