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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW17094 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 281aa MW: 32135.5 Da PI: 8.2032 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 56.8 | 5e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+ Ed++l++++k +G g Wk ++++ g++R++k+c++rw++yl
OIW17094 14 KGAWTAMEDKILKEYIKIHGEGKWKHVPKRAGLKRCGKSCRLRWLNYL 61
79********************************************97 PP
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| 2 | Myb_DNA-binding | 47.6 | 3.9e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T +E++l+++++++lG++ W+ Ia +++ gRt++++k++w++
OIW17094 67 RGNITNDEEDLIIRLHNLLGNR-WSIIAGRLP-GRTDNEIKNYWNT 110
7999******************.*********.***********97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 281 aa Download sequence |
MGRNPCCSKG GLSKGAWTAM EDKILKEYIK IHGEGKWKHV PKRAGLKRCG KSCRLRWLNY 60 LRPGIKRGNI TNDEEDLIIR LHNLLGNRWS IIAGRLPGRT DNEIKNYWNT NIRRKLENGI 120 IPCCSTKSAE PCLSNSVQKE HYSNPTNKGL CMVHTKGTKL TQVTVTKDIA QQNEGIKTND 180 NKMKGPSLSS ERDNNELWDF MDDFEIDDNF FSELLKMDLP KSSLESKIME ENRNRSIVDL 240 GQFSVKSSTD EAQFLWGDSV YDTDSDLQLM ETLQEIGFDR L |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G35550.1 | 7e-61 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW17094 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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