PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW17218
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 328aa    MW: 37393.5 Da    PI: 6.6688
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW17218genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.22.4e-12193218126
               --S---SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
               y   +C+++ +tG+C yGd+CkF+H+
  OIW17218 193 YQPDICKDYKETGYCGYGDSCKFMHD 218
               67789********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MADSDEVAKS TENQQTEQVC SFFRKPVNKK NIRKRTVDNE DDEDSRNESS LLHIQKKTLK  60
PDNKLYFSSS TSKSSASAEP SEESEKPVFH FESTREIQVQ HDNKATATLE TETDFSRDAR  120
AIRERALKQA EESLKGKGTR SEGGDKLYKG LNSYKDYKAG FRREQTIASE KAGGSHGPLR  180
ASAHIRVSAR FDYQPDICKD YKETGYCGYG DSCKFMHDRG DYKSGWQMEK EWEEAEKARK  240
MRLAAGEDAE EEGASLTDED DEDALPFACF ICRNPFLDPV VTKCKHYFCE HCALKHHAKN  300
KKCFVCNQPT LGIFNVAQEI RRKMAEDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.11e-138C3H family protein