PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17608

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 258aa MW: 28454.8 Da PI: 8.0681

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17608	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.1	3.7e-19	89	143	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +k+ +++keq +Le+ F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k OIW17608 89 KKKLRLSKEQALVLEDTFKEHNTLNPKQKQALANQLNLRPRQVEVWFQNRRARTK 143 778899***********************************************98 PP
2	HD-ZIP_I/II	125.2	2.9e-40	89	178	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+ +LE++F+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l OIW17608 89 KKKLRLSKEQALVLEDTFKEHNTLNPKQKQALANQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCEHLSEENRRLQKEVQELR-TL 178 59*************************************************************************************9.44 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MTDRTSEPPS FLRGIAVNAA PPPSLAVASA GDDENGVSSP NSTVSSVSGK RLEREANGDD 60 TDAAERASCT RGGSDDDGGD GDGDGENSKK KLRLSKEQAL VLEDTFKEHN TLNPKQKQAL 120 ANQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCEH LSEENRRLQK EVQELRTLKL 180 SSHLYMHMNP PTTLTMCPSC QRVGVSSTSS SSPATMPSAP ALANCNRLGL NIQRPVPINH 240 WVPMQIQHRP FDIPTSRP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	94	SKKKLRL
2	138	146	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44910.1	6e-71	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW17608