PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17739

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 382aa MW: 42902.7 Da PI: 5.9289

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17739	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	6e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ede+l ++++++G g+W+++++ g+ R++k+c++rw +yl OIW17739 14 KGLWSPDEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	39.9	9.6e-13	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l+ +++ lG++ W+ Ia+ ++ gRt++++k+ w++ OIW17739 67 RGMFSQQEEDLITSLHEVLGNR-WAQIAAQLP-GRTDNEIKNLWNS 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MGRHSCCVKQ KLRKGLWSPD EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLITS LHEVLGNRWA QIAAQLPGRT DNEIKNLWNS CLKKKLLKQG 120 IDPTTHKPLN EGNVKEEKTS TESLQKMQIP ISTSPSATPT LLFSSQCSPL RISDSNSYDD 180 GRLAEEASRE IFMSKQVLDP LSYYDNFQMS VAQNSCYGLP VSSSYQTSIR TLFDQNQFGT 240 NPSYGFSSMP SLTNSDHVSV TEFSSDNNPS SKISSLFMND NNQVKENSSN NSSNMSIYNA 300 GGGGGFHQMM ENAAGFSWDA ENKLEHSFQF NAIKSEDFKT CNSWEEGQQN LQTHGSIDFS 360 CYPLTSLSED LTGANFDIFQ QI

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MGRHSCCVKQ KLRKGLWSPD EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SQQEEDLITS LHEVLGNRWA QIAAQLPGRT DNEIKNLWNS CLKKKLLKQG  120
IDPTTHKPLN EGNVKEEKTS TESLQKMQIP ISTSPSATPT LLFSSQCSPL RISDSNSYDD  180
GRLAEEASRE IFMSKQVLDP LSYYDNFQMS VAQNSCYGLP VSSSYQTSIR TLFDQNQFGT  240
NPSYGFSSMP SLTNSDHVSV TEFSSDNNPS SKISSLFMND NNQVKENSSN NSSNMSIYNA  300
GGGGGFHQMM ENAAGFSWDA ENKLEHSFQF NAIKSEDFKT CNSWEEGQQN LQTHGSIDFS  360
CYPLTSLSED LTGANFDIFQ QI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	1e-80	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW17739