PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17774

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 394aa MW: 43589.6 Da PI: 8.4309

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17774	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.6	6.5e-42	95	171	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls++++yhrrhkvCe hsk+p+v++ g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ OIW17774 95 CLVDGCKADLSDCRDYHRRHKVCELHSKTPQVTIGGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQP 171 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDWNLKSPSL DLTEVKKGTA FPNMETVDEG SSRFGLYRTN GEFSVDLKLG QIGNVGIESM 60 LYKPKDGASG AGLSKISGSS KRARAFNNGN HIVKCLVDGC KADLSDCRDY HRRHKVCELH 120 SKTPQVTIGG QKQRFCQQCS RFHSLEEFDE GKRSCRKRLD GHNRRRRKPQ PESFMRSSSF 180 LSNYQGTQLL PFSSSQIYSS HAVMNPAWSE GVIASCADIR LHSHKQHQQV NFIDKQDLFL 240 GSFPTTSYKE VKQLAFLQGD HNSTATLNNQ NTNLQTLLRT SPYSESSSGG VRCKMFCDNS 300 LTSSVHDSPC ALSLLSSPQT HNNPGNGLNQ MVQPHSSSFM QPLGLSLHDN NSLEPVDSVL 360 NPNGSDHCSS MYNNIGSNGS QGSGAPQLFP FQWE

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDWNLKSPSL DLTEVKKGTA FPNMETVDEG SSRFGLYRTN GEFSVDLKLG QIGNVGIESM  60
LYKPKDGASG AGLSKISGSS KRARAFNNGN HIVKCLVDGC KADLSDCRDY HRRHKVCELH  120
SKTPQVTIGG QKQRFCQQCS RFHSLEEFDE GKRSCRKRLD GHNRRRRKPQ PESFMRSSSF  180
LSNYQGTQLL PFSSSQIYSS HAVMNPAWSE GVIASCADIR LHSHKQHQQV NFIDKQDLFL  240
GSFPTTSYKE VKQLAFLQGD HNSTATLNNQ NTNLQTLLRT SPYSESSSGG VRCKMFCDNS  300
LTSSVHDSPC ALSLLSSPQT HNNPGNGLNQ MVQPHSSSFM QPLGLSLHDN NSLEPVDSVL  360
NPNGSDHCSS MYNNIGSNGS QGSGAPQLFP FQWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	169	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	2e-67	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW17774