PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17897

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 817aa MW: 94373.5 Da PI: 6.7005

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17897	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.7	4.2e-18	557	610	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k OIW17897 557 KKRRLSVDQVKALEKKFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARYK 610 566899***********************************************9 PP
2	HD-ZIP_I/II	122.8	1.7e-39	556	648	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktk lE+dy +Lk++ydalk + ++L+k++++L +e+ke OIW17897 556 EKKRRLSVDQVKALEKKFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARYKTKVLERDYCVLKANYDALKLNYDTLRKDNSALLKEIKE 648 69**************************************************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MGTATRRISN RRPSESMKVI VIFVVGGVFG LIIGISLPTM SITKLNLQSN LTCIENKDTG 60 NDNISSLQEQ LSNDTSKIWV PTNPRGAQRL PPGIVNAQSD FYLRRLWGIP SEDLTTKPKY 120 LVAFTVGYQQ RMNIDANVKK FSENFTILLF HYDDRTTEWD EFEWSKKAIH VSAHKQTKWW 180 YAKRFLHPDI VAPYDYIFLW DEDLGVENFN AEEYLKMVRK HGLEISQPGL ESVKKLCWNM 240 TKRRDNSEVH KETQEKPGKC KYPTLPPCAA FVEIMAPVFS RDAWRCVWHM IQNEFVHGWG 300 LDFAFRRCVE PAHEKIGVVD TQWVVHQGIP SLGNQAIHVS AHKQTKWWYA KRFLHPDIVA 360 PYDYIFLWDE DLGVENFNAE EYLKMVRKHG LEISQPGLES VKKLCWNMTK RRDNSEVHKE 420 TQEKPGKCKY PTLPPCAAFV EIMAPVFSRD AWRCVWHMIQ NEFVHGWGLD FAFRRCVEPA 480 HEKIGVVDTQ WVVHQGIPSL GNQGIAQTEG NQTKTAARAE HNPRNNNHVY GREFQSMLEG 540 LDEEGYSIEE TGHHSEKKRR LSVDQVKALE KKFEVENKLE PERKVKLAQE LGLQPRQVAV 600 WFQNRRARYK TKVLERDYCV LKANYDALKL NYDTLRKDNS ALLKEIKELK SRAEEENTKS 660 DATVKEEMIT LQQDSSEDLK HDCFNKKNNE GVGADSLFPT EFNRDGASDS DFSATLNEEQ 720 NNNSPIYNPA ISSPGVLQNH NFLMSPSLKF NNCSSSSSPS SMNCFQFQKG NSYQEQYVKM 780 EEHDFFSADE ACNFFSDEQA PTLQWDCSEE WSQANKQ

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MGTATRRISN RRPSESMKVI VIFVVGGVFG LIIGISLPTM SITKLNLQSN LTCIENKDTG  60
NDNISSLQEQ LSNDTSKIWV PTNPRGAQRL PPGIVNAQSD FYLRRLWGIP SEDLTTKPKY  120
LVAFTVGYQQ RMNIDANVKK FSENFTILLF HYDDRTTEWD EFEWSKKAIH VSAHKQTKWW  180
YAKRFLHPDI VAPYDYIFLW DEDLGVENFN AEEYLKMVRK HGLEISQPGL ESVKKLCWNM  240
TKRRDNSEVH KETQEKPGKC KYPTLPPCAA FVEIMAPVFS RDAWRCVWHM IQNEFVHGWG  300
LDFAFRRCVE PAHEKIGVVD TQWVVHQGIP SLGNQAIHVS AHKQTKWWYA KRFLHPDIVA  360
PYDYIFLWDE DLGVENFNAE EYLKMVRKHG LEISQPGLES VKKLCWNMTK RRDNSEVHKE  420
TQEKPGKCKY PTLPPCAAFV EIMAPVFSRD AWRCVWHMIQ NEFVHGWGLD FAFRRCVEPA  480
HEKIGVVDTQ WVVHQGIPSL GNQGIAQTEG NQTKTAARAE HNPRNNNHVY GREFQSMLEG  540
LDEEGYSIEE TGHHSEKKRR LSVDQVKALE KKFEVENKLE PERKVKLAQE LGLQPRQVAV  600
WFQNRRARYK TKVLERDYCV LKANYDALKL NYDTLRKDNS ALLKEIKELK SRAEEENTKS  660
DATVKEEMIT LQQDSSEDLK HDCFNKKNNE GVGADSLFPT EFNRDGASDS DFSATLNEEQ  720
NNNSPIYNPA ISSPGVLQNH NFLMSPSLKF NNCSSSSSPS SMNCFQFQKG NSYQEQYVKM  780
EEHDFFSADE ACNFFSDEQA PTLQWDCSEE WSQANKQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	557	586	KKRRLSVDQVKALEKKFEVENKLEPERKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	6e-63	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW17897