PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17926

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 406aa MW: 46368.9 Da PI: 6.9885

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17926	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.2	0.00013	110	132	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + s L++H H OIW17926 110 CSyeGCGKTFIDASALRKHSHIH 132 77779**************7766 PP
2	zf-C2H2	16.3	2.7e-05	137	161	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H OIW17926 137 YVCHyeGCGKKFLDSSKLKRHFLIH 161 9********************8877 PP
3	zf-C2H2	21.5	5.9e-07	167	191	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH OIW17926 167 FVCPheGCGKAFSLDFNLRSHMKTH 191 89**********************9 PP
4	zf-C2H2	17.6	1e-05	197	221	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H OIW17926 197 HICPypDCGKRYAHEYKLKNHIASH 221 679999*****************96 PP
5	zf-C2H2	12.8	0.00035	265	290	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+++ H OIW17926 265 YACPyeGCEKAYIHEYKLKLHLKReH 290 89*********************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MEIHYSQSYF EKRPIIKSKA PAVKWVKECC YSFSPQFVLA FFLLRSVVYC ANNLKSIVDR 60 VPQDVVATGG KCMLLRWVTE DTLKALKEKE KEPSAPEPEP EPTTEVLFLC SYEGCGKTFI 120 DASALRKHSH IHGERQYVCH YEGCGKKFLD SSKLKRHFLI HTGERDFVCP HEGCGKAFSL 180 DFNLRSHMKT HSQQNYHICP YPDCGKRYAH EYKLKNHIAS HHEKNPSVDV TSVSHVTKYT 240 PPSEKQTKTK HSGAAYGSAS SDRPYACPYE GCEKAYIHEY KLKLHLKREH PEHDEHAQAN 300 ADNEMDEASD QDAYGGGKRS NGKVQKQSKP KPNLKLPQSK VAKRKGSSTP SLATLAAIAK 360 KPWPVKEETY DEEDSEETEE DRDNVEDGWR YAKNNEEDDE ETEYED

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MEIHYSQSYF EKRPIIKSKA PAVKWVKECC YSFSPQFVLA FFLLRSVVYC ANNLKSIVDR  60
VPQDVVATGG KCMLLRWVTE DTLKALKEKE KEPSAPEPEP EPTTEVLFLC SYEGCGKTFI  120
DASALRKHSH IHGERQYVCH YEGCGKKFLD SSKLKRHFLI HTGERDFVCP HEGCGKAFSL  180
DFNLRSHMKT HSQQNYHICP YPDCGKRYAH EYKLKNHIAS HHEKNPSVDV TSVSHVTKYT  240
PPSEKQTKTK HSGAAYGSAS SDRPYACPYE GCEKAYIHEY KLKLHLKREH PEHDEHAQAN  300
ADNEMDEASD QDAYGGGKRS NGKVQKQSKP KPNLKLPQSK VAKRKGSSTP SLATLAAIAK  360
KPWPVKEETY DEEDSEETEE DRDNVEDGWR YAKNNEEDDE ETEYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-136	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW17926