PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18261

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 499aa MW: 55773.5 Da PI: 6.614

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18261	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.4	9.2e-12	315	357	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+l+P+ + K++ ++iL AveY+k+L OIW18261 315 MAERRRRKKLNDRLYMLRSLVPNiS------KMDRSSILGDAVEYLKEL 357 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MMSRGSWVVE ADREQQHSNG NNINKDELSS LCGFKPMFEV NEEWYMTNNT NQNNMVFSPN 60 FADTDNILLH SLDSSSSILT NLHSSQVQHF LPPKPTFSSL LNTNPLEHGF DHNGYEVGFL 120 EPQASNSNNT SNNNQLSTLS SYLSLDPHLE TMCMNMIPQV PQSSVEFDGF HNLQESSRDG 180 LVLNRSNILK PLETFPQSGA VQPTLFQKRA ALWNKNLTDK KSNLSKCEVL QEVNCDKKRK 240 MSNREDHAEG GSFDGSGGGL NNYDSDNEIT ESIDNNKMEE NGKSGGNSSN GNSNISGLDQ 300 KGKKKKNGMP AKNLMAERRR RKKLNDRLYM LRSLVPNISK MDRSSILGDA VEYLKELLKR 360 INDLHNELES TPSGSSLTTA SSFPHLSPTL PILHNRIKEQ LCPTSLLSPN GQPARVEVRV 420 REGRVINIHM FCVRKPGILL STMKTLDNLG LDIQQGVISY FNGFAMDIFR AEQCMEGHDI 480 HPEQIKAALL DSAGFHNMT

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MMSRGSWVVE ADREQQHSNG NNINKDELSS LCGFKPMFEV NEEWYMTNNT NQNNMVFSPN  60
FADTDNILLH SLDSSSSILT NLHSSQVQHF LPPKPTFSSL LNTNPLEHGF DHNGYEVGFL  120
EPQASNSNNT SNNNQLSTLS SYLSLDPHLE TMCMNMIPQV PQSSVEFDGF HNLQESSRDG  180
LVLNRSNILK PLETFPQSGA VQPTLFQKRA ALWNKNLTDK KSNLSKCEVL QEVNCDKKRK  240
MSNREDHAEG GSFDGSGGGL NNYDSDNEIT ESIDNNKMEE NGKSGGNSSN GNSNISGLDQ  300
KGKKKKNGMP AKNLMAERRR RKKLNDRLYM LRSLVPNISK MDRSSILGDA VEYLKELLKR  360
INDLHNELES TPSGSSLTTA SSFPHLSPTL PILHNRIKEQ LCPTSLLSPN GQPARVEVRV  420
REGRVINIHM FCVRKPGILL STMKTLDNLG LDIQQGVISY FNGFAMDIFR AEQCMEGHDI  480
HPEQIKAALL DSAGFHNMT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	240	KKSNLSKCEVLQEVNCDKKRK
2	303	323	KKKKNGMPAKNLMAERRRRKK
3	304	324	KKKKNGMPAKNLMAERRRRKK
4	317	324	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	4e-98	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW18261