PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18285

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 390aa MW: 43316.9 Da PI: 7.6246

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18285	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.1	1.9e-41	98	175	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C v++C++dls++++yhrrhkvCe hsk+p+v++ g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ OIW18285 98 TCLVDECKSDLSNCRDYHRRHKVCELHSKSPQVTIGGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQP 175 5**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MDWNLKSPSL DLTEVDQGTT FPNMETVDEG SSRYGVYRTK GEFSVDLKLG QVGNFGIESV 60 MAKPKDTYAA AGVSKMASSP SGSSKRARAF NNGNHVVTCL VDECKSDLSN CRDYHRRHKV 120 CELHSKSPQV TIGGQKQRFC QQCSRFHSLE EFDEGKRSCR KRLDGHNRRR RKPQPEPLTR 180 SSNFLSNYQG TQLLPFSSSH IYSSTAMVNP AWNGVVTSSA DVRLQNQHQQ VNFIEKQDLF 240 LGSSPTSYKE GKQLAFLQGD HNQNTHHLHT LLRTSPYSES SEGLRSKMFF DNNNSLTSSV 300 HESPCALSLL SSPQVHNNPG NGLNQMVQPH SSSLMQPLGL SLHDNNNNSL ESVEPVLDPN 360 GSDHCSSMYN IGSSGSQGSD APQLFPFQWE

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MDWNLKSPSL DLTEVDQGTT FPNMETVDEG SSRYGVYRTK GEFSVDLKLG QVGNFGIESV  60
MAKPKDTYAA AGVSKMASSP SGSSKRARAF NNGNHVVTCL VDECKSDLSN CRDYHRRHKV  120
CELHSKSPQV TIGGQKQRFC QQCSRFHSLE EFDEGKRSCR KRLDGHNRRR RKPQPEPLTR  180
SSNFLSNYQG TQLLPFSSSH IYSSTAMVNP AWNGVVTSSA DVRLQNQHQQ VNFIEKQDLF  240
LGSSPTSYKE GKQLAFLQGD HNQNTHHLHT LLRTSPYSES SEGLRSKMFF DNNNSLTSSV  300
HESPCALSLL SSPQVHNNPG NGLNQMVQPH SSSLMQPLGL SLHDNNNNSL ESVEPVLDPN  360
GSDHCSSMYN IGSSGSQGSD APQLFPFQWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	173	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	4e-72	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW18285