PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18301

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 1679aa MW: 189555 Da PI: 8.3569

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18301	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00038	1589	1611	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H OIW18301 1589 CPvkGCGKKFFSHKYLVQHRRVH 1611 9999*****************99 PP
2	zf-C2H2	11.7	0.00083	1647	1673	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H OIW18301 1647 YVCAepGCGQTFRFVSDFSRHKRKtgH 1673 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1679 aa Download sequence
MADPEILPWL KSMPVAPEYR PTLAEFQDPI AYIFKIEKEA SRYGICKIIP PVPPCSKKTA 60 ISNLNRSQPS FTTRQQQIGF CPRRAQPVRR PVWKSGTYYT FKEFEAKAKA FEKTYLKKHC 120 SKKSNNSAAV APSALEVETL YWKATLDKPF SVEYANDMPG SAFGPVSNGG ESVGDSAWNM 180 RVVSRANGSL LRFMKEEIPG VTSPMVYVAM LFSWFAWHVE DHDLHSLNYL HFGAPKTWYG 240 VPRDAAFAFE EVVRVHGYGG EINPLVTFAI LGEKTTVMPP EVFIGAGVPC CRLVQNAGEF 300 VVTFPGAYHT GFSHGFNCGE ASNIATPEWL RVAKDAAIRR ASINYPPMVS HFQLLYDLGL 360 ALCSRIPEGT NTKPRSSRLK DKRKGEGETV IKELFVKDVL QNNDLLHVLS KGSAIVLLPH 420 RSYDFSVCST LRIGSQQLKV NPESMNVSSK GVNSSKGLIS DDLAFVTNDG IKQVKGFYSV 480 KEKFATQCER NRTSSLSKLG NTCTSRSKTV QKDTEQETSE GDGLSDQRLF SCVTCGILSF 540 ACVAIVQPRE PAARYLMSAD YGFFTDSVAG SGGTSHKFTI AHEEWTEQNA RNDLYDAPVE 600 SVKQQTQIAD QNYESLNTEQ TKGSTALSLL ASAYGDSSDS EEDQGNSDIA VEGDELNMIN 660 PPSASRSQEI SCLPSHSQDG HASPGVRLDK EDYIPSKSSD SHEDYMRTRV EHVMSPSNWS 720 VKSEDHDITS GVVFKNMMAV PHSMLSCPQD VETSLLGKAV IPIDKHSSLV PLSDEDSSRM 780 HVFCLEHAVE AEQQLRPIGG AHILLLCHPD YTKIEAEAKL VAEELSIDYT WKNNAYRHAN 840 KDDEERIQSA LDSEEATSGN GDWAVKLGIN LFYSANLSRS PLYSKQMPYN SVIYFAFGCS 900 SPESSPAEPK VYRRRGNRQK KVVAGKWCGK VWMSNQVHPL LVKGEAEDIE DEKSLHGWPL 960 HDVKIERSEG IHKSNTTIRN SSRKRKMAVE SGGSRKGSFG VRDCLSDDSI EDKSNQHQRR 1020 ILRSKRTRHI EKDDAASEGD YSPLKHHRKP ISKHTKCVES DTISDDSLDD NSHIQHRKNA 1080 NANEAEFIDN DVVSDDAVSE DSDCSPRGEL SSEQDAISDD SLAVGSLKLH RKTPKSKYGK 1140 YIAEEDEISD DDQVEVCFQK EQRRIPKSKQ HKCLSEKDTM ISDDQLAHRV RKQQQKNPKS 1200 KIDKYHAGED IISDDQLEVP SRKYQRRIPK NKQAKCIAGK IVMSGGQLEN HFQKHQRSVP 1260 RSWQIKCCDR EIMDDKIENN SRRLCKTPKR RQPECMDEEN INSDDQKDDS LQRRRTARGR 1320 QSKPQTLQQM KQVKCKDEDS SNSDDQMEDD SQQQRRTVRS KNSKSQTLQQ MKQAKWKGED 1380 NISSGDQMEG DSQKHRRTVR GKKSKSQTLQ QMKQAKWKDE ENTNSDDEME DDSHQHRKTV 1440 QSKQSKSQTL QQMKQANSAH GRRQTSRPVK RGAQMLMKSK PPRQMKQQPC VQNNQSEEEE 1500 EEDVEGEEEQ VGGPSTRLRK RVPKLEESEG KSKEKETKRK RVKIATTAKV SARQAKMKDE 1560 EAEYQCDIEG CTMGFGSKQE LMHHKRNICP VKGCGKKFFS HKYLVQHRRV HEDDRPLKCP 1620 WKGCKMTFKW AWARTEHIRV HTGARPYVCA EPGCGQTFRF VSDFSRHKRK TGHSTRKSC

Sequence ? help Back to Top

Protein Sequence Length: 1679 aa Download sequence

MADPEILPWL KSMPVAPEYR PTLAEFQDPI AYIFKIEKEA SRYGICKIIP PVPPCSKKTA  60
ISNLNRSQPS FTTRQQQIGF CPRRAQPVRR PVWKSGTYYT FKEFEAKAKA FEKTYLKKHC  120
SKKSNNSAAV APSALEVETL YWKATLDKPF SVEYANDMPG SAFGPVSNGG ESVGDSAWNM  180
RVVSRANGSL LRFMKEEIPG VTSPMVYVAM LFSWFAWHVE DHDLHSLNYL HFGAPKTWYG  240
VPRDAAFAFE EVVRVHGYGG EINPLVTFAI LGEKTTVMPP EVFIGAGVPC CRLVQNAGEF  300
VVTFPGAYHT GFSHGFNCGE ASNIATPEWL RVAKDAAIRR ASINYPPMVS HFQLLYDLGL  360
ALCSRIPEGT NTKPRSSRLK DKRKGEGETV IKELFVKDVL QNNDLLHVLS KGSAIVLLPH  420
RSYDFSVCST LRIGSQQLKV NPESMNVSSK GVNSSKGLIS DDLAFVTNDG IKQVKGFYSV  480
KEKFATQCER NRTSSLSKLG NTCTSRSKTV QKDTEQETSE GDGLSDQRLF SCVTCGILSF  540
ACVAIVQPRE PAARYLMSAD YGFFTDSVAG SGGTSHKFTI AHEEWTEQNA RNDLYDAPVE  600
SVKQQTQIAD QNYESLNTEQ TKGSTALSLL ASAYGDSSDS EEDQGNSDIA VEGDELNMIN  660
PPSASRSQEI SCLPSHSQDG HASPGVRLDK EDYIPSKSSD SHEDYMRTRV EHVMSPSNWS  720
VKSEDHDITS GVVFKNMMAV PHSMLSCPQD VETSLLGKAV IPIDKHSSLV PLSDEDSSRM  780
HVFCLEHAVE AEQQLRPIGG AHILLLCHPD YTKIEAEAKL VAEELSIDYT WKNNAYRHAN  840
KDDEERIQSA LDSEEATSGN GDWAVKLGIN LFYSANLSRS PLYSKQMPYN SVIYFAFGCS  900
SPESSPAEPK VYRRRGNRQK KVVAGKWCGK VWMSNQVHPL LVKGEAEDIE DEKSLHGWPL  960
HDVKIERSEG IHKSNTTIRN SSRKRKMAVE SGGSRKGSFG VRDCLSDDSI EDKSNQHQRR  1020
ILRSKRTRHI EKDDAASEGD YSPLKHHRKP ISKHTKCVES DTISDDSLDD NSHIQHRKNA  1080
NANEAEFIDN DVVSDDAVSE DSDCSPRGEL SSEQDAISDD SLAVGSLKLH RKTPKSKYGK  1140
YIAEEDEISD DDQVEVCFQK EQRRIPKSKQ HKCLSEKDTM ISDDQLAHRV RKQQQKNPKS  1200
KIDKYHAGED IISDDQLEVP SRKYQRRIPK NKQAKCIAGK IVMSGGQLEN HFQKHQRSVP  1260
RSWQIKCCDR EIMDDKIENN SRRLCKTPKR RQPECMDEEN INSDDQKDDS LQRRRTARGR  1320
QSKPQTLQQM KQVKCKDEDS SNSDDQMEDD SQQQRRTVRS KNSKSQTLQQ MKQAKWKGED  1380
NISSGDQMEG DSQKHRRTVR GKKSKSQTLQ QMKQAKWKDE ENTNSDDEME DDSHQHRKTV  1440
QSKQSKSQTL QQMKQANSAH GRRQTSRPVK RGAQMLMKSK PPRQMKQQPC VQNNQSEEEE  1500
EEDVEGEEEQ VGGPSTRLRK RVPKLEESEG KSKEKETKRK RVKIATTAKV SARQAKMKDE  1560
EAEYQCDIEG CTMGFGSKQE LMHHKRNICP VKGCGKKFFS HKYLVQHRRV HEDDRPLKCP  1620
WKGCKMTFKW AWARTEHIRV HTGARPYVCA EPGCGQTFRF VSDFSRHKRK TGHSTRKSC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	982	987	SRKRKM
2	1519	1541	RKRVPKLEESEGKSKEKETKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW18301