PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18519

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 607aa MW: 69233.2 Da PI: 5.0332

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18519	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	294	315	1	22
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 + C Cgk F++ + k+H ++ OIW18519 294 FYCVLCGKKFKSEKQWKNHEQS 315 78*****************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MASAKRCHYE VLGVSLDSTA DEIRSAYRRL ALQRHPDKLV QSGISQSEAT AQFQELQHAY 60 EVLSDPKERT WYDSHRSQIL FSDPNSVGSS VVPDLFSFFS NTVFNGYSDS GKGFYKVYSD 120 VFDKIHANEI NFAKKMGIGV DSVRQAPVMG NLESPYAQVT AFYSYWLGFV TIMDFCWADE 180 YDAMAGPNRK SRRLMEEENN KARRKARKEY NDTVRKLADF TKKRDKRVID MKVKKNAELE 240 KKKEDEMVMK RKLEKERKER AMKYEEPEWA KVEEDNEDDW VEDLEEETKA EKEFYCVLCG 300 KKFKSEKQWK NHEQSKKHKE KVAEFRDSLD DDEEEQVEED LEVEIEGEGL HSEGYGVEVN 360 DDRLVEDDYG VDDLEGRVRD GLNVTEEESR NGVELDNDDG GEFFDAKEGH AAGVSVDFGE 420 DDEIGVLEAM VAGHKSRKPN ASTQKPKDWA DTTHIENVND GDGPMEYDNR KSARKKRRNK 480 KEKGKENWEE SHVAAANADL ENLDSKGNND SYTEESCSSQ HFVGNDTNGK ENEPIGRDKK 540 ASSQVADKKG TAKDTKTKAK TSSKERKGKA TSKNVGNSCD ACGEEFESRN KLHMHLGETG 600 HGTIKRR

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MASAKRCHYE VLGVSLDSTA DEIRSAYRRL ALQRHPDKLV QSGISQSEAT AQFQELQHAY  60
EVLSDPKERT WYDSHRSQIL FSDPNSVGSS VVPDLFSFFS NTVFNGYSDS GKGFYKVYSD  120
VFDKIHANEI NFAKKMGIGV DSVRQAPVMG NLESPYAQVT AFYSYWLGFV TIMDFCWADE  180
YDAMAGPNRK SRRLMEEENN KARRKARKEY NDTVRKLADF TKKRDKRVID MKVKKNAELE  240
KKKEDEMVMK RKLEKERKER AMKYEEPEWA KVEEDNEDDW VEDLEEETKA EKEFYCVLCG  300
KKFKSEKQWK NHEQSKKHKE KVAEFRDSLD DDEEEQVEED LEVEIEGEGL HSEGYGVEVN  360
DDRLVEDDYG VDDLEGRVRD GLNVTEEESR NGVELDNDDG GEFFDAKEGH AAGVSVDFGE  420
DDEIGVLEAM VAGHKSRKPN ASTQKPKDWA DTTHIENVND GDGPMEYDNR KSARKKRRNK  480
KEKGKENWEE SHVAAANADL ENLDSKGNND SYTEESCSSQ HFVGNDTNGK ENEPIGRDKK  540
ASSQVADKKG TAKDTKTKAK TSSKERKGKA TSKNVGNSCD ACGEEFESRN KLHMHLGETG  600
HGTIKRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	226	RKSRRLMEEENNKARRKARKEYNDTVRKLADFTKKRDK
2	474	481	RKKRRNKK
3	475	480	KKRRNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	1e-147	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW18519