PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18526

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 380aa MW: 42172.8 Da PI: 9.7472

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18526	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	89.6	7e-28	51	133	3	83
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssas 83 g+kdrhsk++T +g+RdRR+Rls+++a++++dLq++LG+ ++sk i+WL+++ k i++l+ ++ ++ +++ sas OIW18526 51 GGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQNKLGLNQPSKVIDWLIEATKLDIDKLPPLQIPHGFPQfhHQQTLLPSAS 133 79*************************************************************55555333222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MVIENSSEGY QAKKEGNTSN IEKLSMAPST SSRQWSAFRN PRIVRVSSAL GGKDRHSKVC 60 TVRGLRDRRI RLSVPTAIQL YDLQNKLGLN QPSKVIDWLI EATKLDIDKL PPLQIPHGFP 120 QFHHQQTLLP SASHHHQFSL GGFYDANLST SIRDNGGNNQ TLLAKSRYNW DFDLENSRLK 180 GKEGESVMSN ISQKGKWIKT GCEQENQDGI DGYNRQDSTQ RLFHGLLNNA MAYNSSYHSE 240 PSTLSLSQFG SHGSLFPSHV DPHQNSGNGV QFSSYNLAVP STSQLLFSPS SATPSLFTPY 300 APFMANSSVE NDPRQVNHVQ ILSSSSNNSQ VMQPHHPLIQ SFHPLNSPLR RLPIPFNSKL 360 LDSDSNNNRS QPNKGSGSPS

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MVIENSSEGY QAKKEGNTSN IEKLSMAPST SSRQWSAFRN PRIVRVSSAL GGKDRHSKVC  60
TVRGLRDRRI RLSVPTAIQL YDLQNKLGLN QPSKVIDWLI EATKLDIDKL PPLQIPHGFP  120
QFHHQQTLLP SASHHHQFSL GGFYDANLST SIRDNGGNNQ TLLAKSRYNW DFDLENSRLK  180
GKEGESVMSN ISQKGKWIKT GCEQENQDGI DGYNRQDSTQ RLFHGLLNNA MAYNSSYHSE  240
PSTLSLSQFG SHGSLFPSHV DPHQNSGNGV QFSSYNLAVP STSQLLFSPS SATPSLFTPY  300
APFMANSSVE NDPRQVNHVQ ILSSSSNNSQ VMQPHHPLIQ SFHPLNSPLR RLPIPFNSKL  360
LDSDSNNNRS QPNKGSGSPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	5e-56	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW18526