PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18531

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 543aa MW: 60357.4 Da PI: 7.0741

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18531	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.7	6e-42	162	237	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls++k+yh+rh+vCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q OIW18531 162 CQVYGCNKDLSSCKDYHKRHRVCEVHSKTATVTVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 237 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MEPWSYVSEE KGYGSNDTLS LPNKNSILGW ELKTPCTFSN EMLAMGYQNI ENQCFQDLGY 60 PEMLEKHLSG ENDGRITSTT VMAATPNPFY ARGDSNIRVS NSVLDSNGSD SLIDLKLGRL 120 ADNGDAIDLA FCKGAPMLSS SESSTPAKRV RASRLRSQTA YCQVYGCNKD LSSCKDYHKR 180 HRVCEVHSKT ATVTVNGIEQ RFCQQCSRFH LLAEFDDGKR SCRKRLAGHN ERRRKPQMGI 240 HSVKAGRLLQ PCGDSRFQGT MLTSASYICP EILPSRIMPS EKYGMNGFWR PNKSEEWTGF 300 KHLSSMPISN GYSQSRSLFP SYNQKQFPFL HENGATSTTG SIFSDHNIQY PPPLLGAQNS 360 ASRSLFQNTT SLGSEDFNIF ETTTTVQGLP GISDSCALSL LSSLSQNSSR QSSGVQLAHH 420 FVIPSSHSHY YNMSRVSEKM GNSSHTSSNR VSDRFPSEMN PADGNHLNPV LIPDNDDDIV 480 NFGMADGIFQ GSDFMNVKDC LPCEDGATID LLQLSSQLQR VEHQRQPLQV KQENDSFCTL 540 RIT

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MEPWSYVSEE KGYGSNDTLS LPNKNSILGW ELKTPCTFSN EMLAMGYQNI ENQCFQDLGY  60
PEMLEKHLSG ENDGRITSTT VMAATPNPFY ARGDSNIRVS NSVLDSNGSD SLIDLKLGRL  120
ADNGDAIDLA FCKGAPMLSS SESSTPAKRV RASRLRSQTA YCQVYGCNKD LSSCKDYHKR  180
HRVCEVHSKT ATVTVNGIEQ RFCQQCSRFH LLAEFDDGKR SCRKRLAGHN ERRRKPQMGI  240
HSVKAGRLLQ PCGDSRFQGT MLTSASYICP EILPSRIMPS EKYGMNGFWR PNKSEEWTGF  300
KHLSSMPISN GYSQSRSLFP SYNQKQFPFL HENGATSTTG SIFSDHNIQY PPPLLGAQNS  360
ASRSLFQNTT SLGSEDFNIF ETTTTVQGLP GISDSCALSL LSSLSQNSSR QSSGVQLAHH  420
FVIPSSHSHY YNMSRVSEKM GNSSHTSSNR VSDRFPSEMN PADGNHLNPV LIPDNDDDIV  480
NFGMADGIFQ GSDFMNVKDC LPCEDGATID LLQLSSQLQR VEHQRQPLQV KQENDSFCTL  540
RIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	5e-51	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW18531