PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW18550
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family TCP
Protein Properties Length: 383aa    MW: 43985.3 Da    PI: 7.9881
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW18550genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP129.33.7e-401162623133
       TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssasec.eaesssssasnsssg. 88 
                k drhski T++g+RdRR+Rls+++a+rfF Lqd+LGfdk+skt++WLl+qak +ik+ ++              s+ss sec ea+ss         + 
  OIW18550 116 SKGDRHSKIKTAKGLRDRRMRLSLLVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKKVAREknihhhhhhhhvkSASSTSECtEAVSSL--------De 208
               578************************************************************6666666666555444445664333332........03 PP

       TCP  89 ........kaaksaa.kskksqksaasalnlakesrakarararertrekmrik 133
                       k+ k  +  ++ +  ++ ++ ++ kesr+kar+rarert++kmr +
  OIW18550 209 vavsgnhqKHIKGVTkRRRVKVCRKIAFKHIGKESREKARERARERTKQKMRSQ 262
               333333333333333233333334444588889******************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MYSSNSFINS NDLISYPIQF YSSRPFSIES NPTQLETPNT SCALVSPPLS FFHFPSLFEE  60
DQHDIFLEQY QHHLLNHQQS INEAEKVNVN MENISIIADH KAGQGTDPQI PIRRSSKGDR  120
HSKIKTAKGL RDRRMRLSLL VAKRFFGLQD MLGFDKASKT VDWLLNQAKV EIKKVAREKN  180
IHHHHHHHHV KSASSTSECT EAVSSLDEVA VSGNHQKHIK GVTKRRRVKV CRKIAFKHIG  240
KESREKARER ARERTKQKMR SQFLAEPDKS KQCEEATNDN LLSLGSCWNP FETVEGCAGT  300
QSQSVDPSWD VINEVEERNS QGMEHLRTEE GIEQEDSLVI MSKWSPTTIF NYSLTNSGIL  360
QEHHFSEFQS MGKPWEPYNN HNI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1224228KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.21e-27TCP family protein