PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW18684
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family AP2
Protein Properties Length: 513aa    MW: 56178.2 Da    PI: 8.0514
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW18684genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.71.1e-11156212155
       AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
               s y+GV++++++gr++A+++d  +     ++ k  + g ++ +e+Aa+a++ a++k++g
  OIW18684 156 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 212
               57*******************5444.2455536655.779999**************98 PP
2AP247.25.3e-15255306155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  OIW18684 255 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 306
               57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MDSSTSSSPH NTNTNFNNNN NNSLAFSLSN HFPNPSSSQH SSHNLSLFHS FSYPTPTPSL  60
YLTGSNNVEA PPEATNLSIF SGGTKFEDFL GCSTTTAATG APLQLHQFST ETDIYGSELK  120
TTLAACYPRG FGAEPTTEPQ KPSPKKTSDT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR  180
REGQSRKGRQ GGYDKEEKAA RAYDLAALKY WGPTITTNFP ISNYEKELED MKNMTRQEFV  240
ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA  300
AIKFRGLNAV TNFDMSRYDV KNIANSTLPI GGLSSKNKNS TDSVSDQSKS HSDEKDPSNS  360
ASSVSFASHQ QQPPSNSTLS FAIPIKQDPS DYWSILGYHN SNTTSVTTTP TSFQSSTNST  420
PFLMDFSAPP SSDNNTNNAA FLNNGSIFVH PQSGDCSNNS SSIPLATPIF SLNSNSGYVN  480
SSGGYGNWIG PTLHTFQTHD KPSLFQTPIF GME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.11e-130AP2 family protein