PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18720

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 532aa MW: 60146.5 Da PI: 8.3388

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18720	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.1	2.5e-11	353	395	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + ErrRR+++N+ f+ LrellP+ +K +Ka+iL+ A e +ksL OIW18720 353 MSERRRREKLNENFQALRELLPPK-----TKKDKASILTAAKEKLKSL 395 67******************98.....8***********99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MHPMDGIFSL SEATRTDFLS ALVLHLSGCA YICLWRYDSC LTNRLLFLDG FYNVNNQPNS 60 SLARNSVAEE LFNLYQSLTF DVNVDSIPGL AFRNHNPYLE LQQLDLLRLV STEIQVQFFK 120 EARIKTAVFM GCSKGEIELG FTNMSQVDIE AALRGLFPED FFRQTQRINY QNPHSSSSSY 180 SISLSTGSPE CSSLLINNIP VTSMSHHFPE TLGSMVPKMQ PIEARPIHQQ AIQALGQVIP 240 CHFATPEVEH DDAIIRAMIH VISSSSTSDH KHRIPQQNLP YTSSSLVHPV NITAFKKYSA 300 DNKGPDPHIR SNPPRQSLLK KSFACSRSLN SLRIRERIQE AARFTSTQQQ RMMSERRRRE 360 KLNENFQALR ELLPPKTKKD KASILTAAKE KLKSLTAEIE KFNIRNQQLT TFLSTIEANA 420 SNSNFSNEQL KIRVSNVPQS SLSEERMVDL HVTVRGESSQ VDISIRLLEF LKRIQNLSLI 480 CMEANTHVTE GTTINQLTFR IGIIEGSAWN ECTFVEAVRR IVADLLHGHV GK

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MHPMDGIFSL SEATRTDFLS ALVLHLSGCA YICLWRYDSC LTNRLLFLDG FYNVNNQPNS  60
SLARNSVAEE LFNLYQSLTF DVNVDSIPGL AFRNHNPYLE LQQLDLLRLV STEIQVQFFK  120
EARIKTAVFM GCSKGEIELG FTNMSQVDIE AALRGLFPED FFRQTQRINY QNPHSSSSSY  180
SISLSTGSPE CSSLLINNIP VTSMSHHFPE TLGSMVPKMQ PIEARPIHQQ AIQALGQVIP  240
CHFATPEVEH DDAIIRAMIH VISSSSTSDH KHRIPQQNLP YTSSSLVHPV NITAFKKYSA  300
DNKGPDPHIR SNPPRQSLLK KSFACSRSLN SLRIRERIQE AARFTSTQQQ RMMSERRRRE  360
KLNENFQALR ELLPPKTKKD KASILTAAKE KLKSLTAEIE KFNIRNQQLT TFLSTIEANA  420
SNSNFSNEQL KIRVSNVPQS SLSEERMVDL HVTVRGESSQ VDISIRLLEF LKRIQNLSLI  480
CMEANTHVTE GTTINQLTFR IGIIEGSAWN ECTFVEAVRR IVADLLHGHV GK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	355	360	ERRRRE
2	356	361	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-45	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW18720