PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18903

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 157aa MW: 17966.8 Da PI: 5.5431

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18903	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.1	0.00014	32	54	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C++ Fs+ L H++ H OIW18903 32 FTCAFCKRGFSNAQALGGHMNIH 54 89*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MDFNPQNSEK YEHTKWSSSN DQSGVGQVIR SFTCAFCKRG FSNAQALGGH MNIHRRDRAK 60 LRQSCEENFI SLDISMKKTN DHDEILHQLK DHDHDHDNDA LPLFIGRESS SSSSSNEIKG 120 NSVVMEIIEE KKSELDLELR LGIEPQETPN LSTREFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53820.1	3e-19	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW18903