PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18912

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 253aa MW: 27987.3 Da PI: 8.2357

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18912	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00046	99	121	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H OIW18912 99 FSCNYCRRKFFSSQALGGHQNAH 121 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MVTQNLNLEP ENNSEECSQE ASNIPMHETP YDLNLTKEST TSSSCLTNLT NAEANQASMT 60 LNLTLNFNSN DVKFKGTSDT STNIGASASA SASETPRVFS CNYCRRKFFS SQALGGHQNA 120 HKRERTMAKR AMRMGMFNER YTNLASLPLK GSPFRSLGIE AHSAMHQRYM QMPSSLVRAH 180 DMKAGAKFER NHFASPIFMA DDDVNLFWPG SFRRVDQGTC VNLGHAQTSN TSFVPMTLPP 240 PQTSSSPDLT LKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66140.1	2e-40	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW18912