PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19623

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 417aa MW: 44783.1 Da PI: 8.3248

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19623	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.6	1.6e-40	83	188	2	105
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa.kskks 100 ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s +ss+s+ s +++ +s+ ++++s OIW19623 83 PPKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSGSTLSVPSQLRSSYfNPNFS 183 789******************************************************************99998899999999777774444444444444 PP TCP 101 qksaa 105 +++ OIW19623 184 VQQQR 188 44433 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MEGGDDDLHH HHHQHQQHHR QNFPFQLLEK KEDQEAASCS TSSPYPTLAI SPTEPSTSNS 60 NRSNQLVATP STNTSTELSK KPPPKRASTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL 120 GHKSDGETIE WLLQQAEPSV IAATGTGTIP ANFTSLNISL RSSGSTLSVP SQLRSSYFNP 180 NFSVQQQRRT LFPGIGLSSD NNNSNNNTST LLNFQQSNNL SMFQAKQELR DGGGGGGQSS 240 STTLDLSDTN TVEGLGRKRR PIEQDLSSAQ HQMGSYLLQS SAGAIPASHA QIPANIWMVA 300 QAAANSNNQV MSHGDPIWTF PQVNNNAAMY RGTVSSGLHF MNYPTPMALL PGQQQLGSSA 360 AGGGGGGNIN MNEGHLSMLA GLSPYRTVIG VSESQASGSQ SHRGGSDDRH DSTSHHS

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MEGGDDDLHH HHHQHQQHHR QNFPFQLLEK KEDQEAASCS TSSPYPTLAI SPTEPSTSNS  60
NRSNQLVATP STNTSTELSK KPPPKRASTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL  120
GHKSDGETIE WLLQQAEPSV IAATGTGTIP ANFTSLNISL RSSGSTLSVP SQLRSSYFNP  180
NFSVQQQRRT LFPGIGLSSD NNNSNNNTST LLNFQQSNNL SMFQAKQELR DGGGGGGQSS  240
STTLDLSDTN TVEGLGRKRR PIEQDLSSAQ HQMGSYLLQS SAGAIPASHA QIPANIWMVA  300
QAAANSNNQV MSHGDPIWTF PQVNNNAAMY RGTVSSGLHF MNYPTPMALL PGQQQLGSSA  360
AGGGGGGNIN MNEGHLSMLA GLSPYRTVIG VSESQASGSQ SHRGGSDDRH DSTSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	1e-48	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW19623