PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19653

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 519aa MW: 58623.9 Da PI: 8.4413

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19653	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00037	431	453	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k F + L+ H r+H OIW19653 431 HECPICLKIFQSAQALVGHKRSH 453 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MEEDQQLMRQ QHMCKFCSKS FPCGRSLGGH IRSHITKLSS LSAETEYKEK VGSYGYGLRE 60 NPKKTWRISD STSEDTLLTL TTERFCKECG KGFHSWKALF GHMKCHSNNE KVSKRSVEDQ 120 DSVTNNNASS SHNQKLVLHI QSDNEGTAPS RRRRRSKRRR TSYMACANTN PCTFSLSEVE 180 HEQEQVAMSL VMLSRDLSPW SGVNSVVDFS DINSAYFQPS SSAQTKIEKM KKPMLICSSE 240 IAKVINESEK LEFVNCVSGN LNSKGKSSES SATEFMKSKK GKKCELDYVS ALENSEGNRV 300 NETESNLSKS TITNKYSSIK TKFFDSELKP KSLKNCADKP SEAAEFSKNT HKRGKFECTT 360 CTKIFHSYQA LGGHRANHKR NKNCFVSKNE NNIDPTTGSM FMKHLVESEI HAGFDNEVAD 420 TITESKKIKV HECPICLKIF QSAQALVGHK RSHLASDSEC TKHFQKVVVL EEPVQEIKEF 480 LDLNLPAEEE STSYADSNRP WWFVENNHKQ EALIGLMSS

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MEEDQQLMRQ QHMCKFCSKS FPCGRSLGGH IRSHITKLSS LSAETEYKEK VGSYGYGLRE  60
NPKKTWRISD STSEDTLLTL TTERFCKECG KGFHSWKALF GHMKCHSNNE KVSKRSVEDQ  120
DSVTNNNASS SHNQKLVLHI QSDNEGTAPS RRRRRSKRRR TSYMACANTN PCTFSLSEVE  180
HEQEQVAMSL VMLSRDLSPW SGVNSVVDFS DINSAYFQPS SSAQTKIEKM KKPMLICSSE  240
IAKVINESEK LEFVNCVSGN LNSKGKSSES SATEFMKSKK GKKCELDYVS ALENSEGNRV  300
NETESNLSKS TITNKYSSIK TKFFDSELKP KSLKNCADKP SEAAEFSKNT HKRGKFECTT  360
CTKIFHSYQA LGGHRANHKR NKNCFVSKNE NNIDPTTGSM FMKHLVESEI HAGFDNEVAD  420
TITESKKIKV HECPICLKIF QSAQALVGHK RSHLASDSEC TKHFQKVVVL EEPVQEIKEF  480
LDLNLPAEEE STSYADSNRP WWFVENNHKQ EALIGLMSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	3e-35	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW19653