PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19673

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 547aa MW: 60535.1 Da PI: 6.811

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19673	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.3	3.8e-42	168	243	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls++k+yh+rh+vCevhsk++ v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q OIW19673 168 CQVYGCNKDLSSCKDYHKRHRVCEVHSKTAIVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 243 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MESWSYVSEE KGYGSNDTLS PPTTFGRSKS SILGWELKTP CSFSNDLLAL GHQNIDNQGF 60 EDLGYPEMLG KNLYDDLDGG HGSRITGTTT VMAATPNPFS ARGDCNFRLP NSNGSDSFID 120 LKLGRFIDHG EAIDAAFSKG APIMSSSESS TPSKRVRASG LRSQTAYCQV YGCNKDLSSC 180 KDYHKRHRVC EVHSKTAIVI VNGIEQRFCQ QCSRFHLLAE FDDGKRSCRK RLAGHNERRR 240 KPQMGIHSGK AGRLLQPCGD SRFQGTMLTS ASYICPDMLP SRVMPSEKYE MSGFWRPNKA 300 EHGTGFRHLS SLPSSNGYSQ SRSLFPSYNQ KQFPFLHENG ATSTTSVFCD NNIQYPPVLG 360 AQNSRSKSVY YQDSSLRSED FNVFDTTSTV QGLSGISDSC ALSLLSSQSQ NSSSQSSEIP 420 LSHSLVFPNS HSHHYNISQV SEKVGISSLT SSSQVSDRFP SEMNPVDGNH INPVLIPDND 480 ADIVNFEMAD EIFQGSDFLN VKDRLSCEDG TTIDLLQLSS QLQRVEHHRQ SLQVKQENDS 540 FCTLRIT

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MESWSYVSEE KGYGSNDTLS PPTTFGRSKS SILGWELKTP CSFSNDLLAL GHQNIDNQGF  60
EDLGYPEMLG KNLYDDLDGG HGSRITGTTT VMAATPNPFS ARGDCNFRLP NSNGSDSFID  120
LKLGRFIDHG EAIDAAFSKG APIMSSSESS TPSKRVRASG LRSQTAYCQV YGCNKDLSSC  180
KDYHKRHRVC EVHSKTAIVI VNGIEQRFCQ QCSRFHLLAE FDDGKRSCRK RLAGHNERRR  240
KPQMGIHSGK AGRLLQPCGD SRFQGTMLTS ASYICPDMLP SRVMPSEKYE MSGFWRPNKA  300
EHGTGFRHLS SLPSSNGYSQ SRSLFPSYNQ KQFPFLHENG ATSTTSVFCD NNIQYPPVLG  360
AQNSRSKSVY YQDSSLRSED FNVFDTTSTV QGLSGISDSC ALSLLSSQSQ NSSSQSSEIP  420
LSHSLVFPNS HSHHYNISQV SEKVGISSLT SSSQVSDRFP SEMNPVDGNH INPVLIPDND  480
ADIVNFEMAD EIFQGSDFLN VKDRLSCEDG TTIDLLQLSS QLQRVEHHRQ SLQVKQENDS  540
FCTLRIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	2e-53	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW19673