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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW19794 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | HSF | ||||||||
| Protein Properties | Length: 340aa MW: 39182.1 Da PI: 8.5382 | ||||||||
| Description | HSF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HSF_DNA-bind | 115.7 | 2.9e-36 | 25 | 117 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98
Fl+k+y++++d+++++++sw en ++fvv+ + efa++vL++yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+ll++i+
OIW19794 25 FLTKTYQLVDDPNTNHIVSWGENDTTFVVWRPPEFARDVLSNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKHLLCEIH 112
9*****************************************************************99.........******************** PP
XXXXX CS
HSF_DNA-bind 99 rkkse 103
r+k++
OIW19794 113 RRKTA 117
**986 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 340 aa Download sequence |
MDLLLDNSEG LLLSLDSHKS VPAPFLTKTY QLVDDPNTNH IVSWGENDTT FVVWRPPEFA 60 RDVLSNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPQ 120 QVTMNHNHHL SSPLATNNVP SFFPFHDRVS ISPPTDSNEL PIWCDSPPLT SPTSERSNYN 180 TSVTALSEDN ERLRKSNNVL LSELAHMKKL YNDIIYFVQN HVKHVPPNNN TYYPSAPIMM 240 QRQMNKQVKG CYYDYYSTNP RQNSPSNTSR SSITIFEKPG GNSSCKTKLC GVSLQSKKRV 300 HPEYGSNNVI DYSEINYKTR LVLEKDDELS LKLMLPNPSC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G46264.1 | 1e-111 | HSF family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW19794 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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