PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19813

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 405aa MW: 44114.7 Da PI: 6.3952

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19813	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.2	3.9e-10	244	292	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq OIW19813 244 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 292 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MGFEHGNENF LKCASLSGLS TTNVSEMATS SVSMAPSDHV TNTPFLASSA WDPLVETLSQ 60 AQTFGGSSMV SHGDFGNTSH LVQYMCNSNL RDIVSEVPSY ASRNFSETVG TFGQLGYRSN 120 YNVIKDGGTE SAPVNCEQSH VENSATEEGD PGSGPSGNRR KRSFDHNSSF RPNKNAEGDS 180 MKDSPGKSSG GAKEHGKKQK VEQNSSADLH GKQLEKQGKE NSQSGEAHKD NFIHVRARRG 240 QATNSHSLAE RVRREKISER MRLLQELVPG CNKITGKAVM LDEIINYVQS LQQQVEFLSM 300 KLATVNPELN FDVERILSKD ILQSRIGHGI SGYGPGISSS HPFPNTTFQG TMPGMPSTST 360 QFPPLPQTVL DHEFLSFYGM GYDSSTALEN LGPNEDNLLD LSIRK

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MGFEHGNENF LKCASLSGLS TTNVSEMATS SVSMAPSDHV TNTPFLASSA WDPLVETLSQ  60
AQTFGGSSMV SHGDFGNTSH LVQYMCNSNL RDIVSEVPSY ASRNFSETVG TFGQLGYRSN  120
YNVIKDGGTE SAPVNCEQSH VENSATEEGD PGSGPSGNRR KRSFDHNSSF RPNKNAEGDS  180
MKDSPGKSSG GAKEHGKKQK VEQNSSADLH GKQLEKQGKE NSQSGEAHKD NFIHVRARRG  240
QATNSHSLAE RVRREKISER MRLLQELVPG CNKITGKAVM LDEIINYVQS LQQQVEFLSM  300
KLATVNPELN FDVERILSKD ILQSRIGHGI SGYGPGISSS HPFPNTTFQG TMPGMPSTST  360
QFPPLPQTVL DHEFLSFYGM GYDSSTALEN LGPNEDNLLD LSIRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	200	RRKRSFDHNSSFRPNKNAEGDSMKDSPGKSSGGAKEHGKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	9e-74	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW19813