PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19834

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 313aa MW: 36018.2 Da PI: 6.6046

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19834	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+ ++++ g+ R++k+c++rw +yl OIW19834 14 RGLWSPEEDEKLIRYIATHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	51.1	3e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T eE++l++ ++ G++ W+ Ia++++ gRt++++k++w+++ OIW19834 67 RGRFTHEEEKLIISLHGVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89******************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIA THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF THEEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPW 120 VSSNSNIAKG VDHHSLFNYH SNQLDHYANY KQDNLTTKPP PVQETLFSST CPQFMFDTSS 180 LDHGTTTLTD NNLRPELFQG SVGLSTETWN LSHNHQVHAP FTAGMDNTNY LPPLIENVEN 240 MVPFEVQSCS MNDKGEDALE CLQRQELNEW VEIQQQQCPN FLFCWDNVEG QHSGEELAPN 300 LSNMGTNTLP SFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	6e-93	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW19834