PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19932

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 549aa MW: 60448.7 Da PI: 5.9925

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19932	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.4e-11	367	409	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L OIW19932 367 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 409 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MMSRTSSVSW MDHDNNNNNR ENQHQDCASP SWLRNTKVQN TNLNTCGFVE TRDELGSICG 60 FKQPMMEVVD EEWYIANNSI QNHPTDMIRD MTFSPNFADP TDNLLLHHHV PIDSSSSCSP 120 SSSMFNNLDP SQVHQYFLPP KPNTFSSLLN NNNNNPFEMG SEVGFLEPQA STTSPSVLNR 180 TSSTLLGAFN DLNSKNQLST LPNLASSSII QLQQDTTNFA GFQNNFEEGS GGNNKAMFLN 240 RSKILRPLES LPPSGAQPTL FQKRAALRKN MGSESGIGVG IGGSVFGEGS DRKMMKMSNS 300 VELDVEDGSF DGSGLNYDSD DLTESNNKVE ENNGRNGGNS SNGNSTVTGG VVDQKGKKKG 360 MPAKNLMAER RRRKKLNDRL YMLRSVVPKI SKMDRASILG DAIEYLKELL QRINDLHNEL 420 ESTPSSSSLT PVSSTFHPLT PTLPSRIKEE LCPSSLPSPN GQPARVEVRL REGRAVNIHM 480 FCSRKPGILL STMRALDNMG LDIQQAVISC FNGFAMDIFR AEQCIEGQDV HPEQIKAVLL 540 DSVGFPGMI

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MMSRTSSVSW MDHDNNNNNR ENQHQDCASP SWLRNTKVQN TNLNTCGFVE TRDELGSICG  60
FKQPMMEVVD EEWYIANNSI QNHPTDMIRD MTFSPNFADP TDNLLLHHHV PIDSSSSCSP  120
SSSMFNNLDP SQVHQYFLPP KPNTFSSLLN NNNNNPFEMG SEVGFLEPQA STTSPSVLNR  180
TSSTLLGAFN DLNSKNQLST LPNLASSSII QLQQDTTNFA GFQNNFEEGS GGNNKAMFLN  240
RSKILRPLES LPPSGAQPTL FQKRAALRKN MGSESGIGVG IGGSVFGEGS DRKMMKMSNS  300
VELDVEDGSF DGSGLNYDSD DLTESNNKVE ENNGRNGGNS SNGNSTVTGG VVDQKGKKKG  360
MPAKNLMAER RRRKKLNDRL YMLRSVVPKI SKMDRASILG DAIEYLKELL QRINDLHNEL  420
ESTPSSSSLT PVSSTFHPLT PTLPSRIKEE LCPSSLPSPN GQPARVEVRL REGRAVNIHM  480
FCSRKPGILL STMRALDNMG LDIQQAVISC FNGFAMDIFR AEQCIEGQDV HPEQIKAVLL  540
DSVGFPGMI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	357	375	KKKGMPAKNLMAERRRRKK
2	369	376	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-121	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW19932