PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19968

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 190aa MW: 21923.9 Da PI: 8.0319

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19968	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.5	1.3e-19	28	81	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t++ql+ Le+ F+k+ +++ e++ +L+k+lgL+ rq+ vWFqNrRa++k OIW19968 28 KKKRLTNDQLDSLESSFQKEIKLDPEKKMKLSKELGLQPRQIAVWFQNRRARWK 81 45679************************************************9 PP
2	HD-ZIP_I/II	117.7	6.5e-38	27	118	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+++q+ +LE+sF++e kL+pe+K++l++eLglqprq+avWFqnrRAR+ktkqlE+ y++Lk+++d +++e+++L++ev +L++ l+ OIW19968 27 EKKKRLTNDQLDSLESSFQKEIKLDPEKKMKLSKELGLQPRQIAVWFQNRRARWKTKQLENLYDSLKQEFDVISKEKQKLQEEVVKLKAMLR 118 69**************************************************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MEVKHQSLAE TIPEAMGKIN SENQLMEKKK RLTNDQLDSL ESSFQKEIKL DPEKKMKLSK 60 ELGLQPRQIA VWFQNRRARW KTKQLENLYD SLKQEFDVIS KEKQKLQEEV VKLKAMLRDQ 120 ASRTNISAGY TEISGEETVE STSEALRCCN KPAITIHQQQ NIADGNCSFT VQDYNTVPVP 180 PYWAGVPYYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	57	KKKRLTNDQLDSLESSFQKEIKLDPEKKMK
2	76	84	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	6e-45	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW19968