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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW19980 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 279aa MW: 31191.3 Da PI: 9.8727 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 56.7 | 5.6e-18 | 20 | 65 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W +eEde+l+++v q+G+ +W+ I++ + gR++k+c++rw++
OIW19980 20 RGHWKPEEDEKLKQLVMQYGPQNWNFISENIE-GRSGKSCRLRWYNQ 65
899*****************************.************96 PP
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| 2 | Myb_DNA-binding | 48.2 | 2.6e-15 | 72 | 117 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+++++ eE+e l+ ++k+ G++ W+tIa+ ++ gRt++ +k++++ +l
OIW19980 72 KKPFSDEEEEMLLTLHKLKGNK-WATIAKFFP-GRTDNAVKNHFHVLL 117
689*******************.*********.***********9875 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 279 aa Download sequence |
MEVLGCNTSS GSESKKSCSR GHWKPEEDEK LKQLVMQYGP QNWNFISENI EGRSGKSCRL 60 RWYNQLSPNM IKKPFSDEEE EMLLTLHKLK GNKWATIAKF FPGRTDNAVK NHFHVLLARR 120 KRARLALFGN TLSHNSRTEN FNIGMFDMPL ISASSTITSS FDSSGVSSTA GEKYPFGSSS 180 ILSSYQSFTA PGIPSVGKVV PLQIKFSNSS YNHRIENLIK SSNTSKQARD NSMAMCKLSM 240 NIHEQEQHEG INIKQKSVAF IDFLGVGSSS GHDESIIRP |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G33450.1 | 4e-52 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW19980 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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