PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW20041

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 193aa MW: 21234.4 Da PI: 6.2233

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20041	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136.9	7e-43	40	139	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+++la++++e OIW20041 40 PCAACKILRRRCVEKCVLAPYFPPNDPIKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQVQLAKAQAE 139 7***********************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MLSNSPPSSS SSPPFPSPSQ SPPSPFPPPP SPPPSVVLSP CAACKILRRR CVEKCVLAPY 60 FPPNDPIKFT IAHRVFGASN IIKFLQELPE SQRADAVSSM VYEANARIRD PVYGCAGAIC 120 QLQKQVSELQ VQLAKAQAEL VNMHCQQTNL VALICMEMTQ SQDQQLLQPQ QHIDMNCFID 180 DNSLGCSWEP LWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	1e-73	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW20041