PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW20231

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 281aa MW: 32010.1 Da PI: 8.0631

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20231	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.7	3.6e-15	28	75	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEde l + +k+ G g+W+t +++ g+ R++k+c++rw +yl OIW20231 28 RGPWTREEDEVLSNFIKKEGEGRWRTLPKRAGLLRCGKSCRLRWINYL 75 89****************************99**********97 PP
2	Myb_DNA-binding	47.7	3.5e-15	86	126	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w++yl OIW20231 86 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTYL 126 79*************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MEAKTAINNN KEKKKIITPC CNKIGLKRGP WTREEDEVLS NFIKKEGEGR WRTLPKRAGL 60 LRCGKSCRLR WINYLRPSLK HGHIAPDEED LILRLHRLLG NRWSLIAGRI PGRTDNEIKN 120 YWNTYLSKKL ISQGIDPRTH KPLINSCSNS TITPLPNHSP KLIPLTPINH HHPIPSPHHH 180 INIFNQDFDP NITTTTTTHD YLDQHQATNA NITNDDVSKI GLVIRSNEQN LLCSNNEDHC 240 SDDDVFSSFL NSLINDDHAL SVCDNDLSPP AYGNGVYHHN E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	3e-77	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW20231