PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW20315

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 162aa MW: 18302.3 Da PI: 10.3864

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20315	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00042	36	58	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+ Fs+ L H +H OIW20315 36 FECKTCGRKFSSFQALGGHRTSH 58 89**********99998888777 PP
2	zf-C2H2	15.2	6.4e-05	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ Fs L H+r+H OIW20315 79 HECSICGQKFSLGQALGGHMRRH 101 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MTKRMRENEE KESIALANTL MLLTKSFNKN HVSLEFECKT CGRKFSSFQA LGGHRTSHKK 60 PKLIGNQEIR AETNKPKMHE CSICGQKFSL GQALGGHMRR HKVAATNEEG FDSINDVIAK 120 VPFFKRSNSK RVMCLDLNLT PLENDLKLLF GNKAPQVQLS LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53600.1	9e-47	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW20315