PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW20446
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 167aa    MW: 19231.1 Da    PI: 9.643
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW20446genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.61.9e-29959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              krien+snrqvt+skR+ngilKKA+E+ vLCda++++iif+s+gkl+ey+s
  OIW20446  9 KRIENTSNRQVTYSKRKNGILKKAKEITVLCDAQISLIIFGSSGKLHEYIS 59
              79***********************************************86 PP
2K-box78.51.7e-2671142172
     K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnel 72 
               yq++sgk l++ak+e+l++e++++kke++++q e+Rhl Ged++sL++keL  Le++Le++lk +R+k++e+
  OIW20446  71 YQRASGKTLWDAKHENLSNEIDRVKKENDSMQIELRHLEGEDISSLNYKELIALENALENGLKDVRQKQMEV 142
               78999*****************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MGRGKIEIKR IENTSNRQVT YSKRKNGILK KAKEITVLCD AQISLIIFGS SGKLHEYISP  60
STTLIDVLDK YQRASGKTLW DAKHENLSNE IDRVKKENDS MQIELRHLEG EDISSLNYKE  120
LIALENALEN GLKDVRQKQM EVHSMFKRNV CGFFSFWINM LNKLNGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.15e-71MIKC_MADS family protein