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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW20493 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 297aa MW: 34373.1 Da PI: 6.1007 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 54.5 | 2.7e-17 | 28 | 75 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT +Ed+ l++ ++ +G g+W+t ar g++Rt+k+c++rw++yl
OIW20493 28 RGPWTVDEDLSLINFIANHGEGRWNTLARSAGLKRTGKSCRLRWLNYL 75
89********************************************97 PP
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| 2 | Myb_DNA-binding | 51.5 | 2.3e-16 | 81 | 124 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg T eE++l++++++q+G++ W++Ia++++ gRt++++k++w++
OIW20493 81 RGHITLEEQLLILELHNQWGNR-WSKIAQYLP-GRTDNEIKNYWRT 124
67789*****************.*********.***********96 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 297 aa Download sequence |
MAIEESMVVK GRDNNNNIGS EEEMDFRRGP WTVDEDLSLI NFIANHGEGR WNTLARSAGL 60 KRTGKSCRLR WLNYLHPDVR RGHITLEEQL LILELHNQWG NRWSKIAQYL PGRTDNEIKN 120 YWRTRVQKHA KHLKCDINSK QFKDTMRYLW MPRLVERIES AAVTATTVPT TVNKSSPTLS 180 TTTNNAYTYS NNLSKKFEVG NSSTAASSNT FETNEVSPIS DLSTDYYNDP ISGNNHNPQD 240 YYQPSEVNYD YITSPYGLFD FQAMEPNTPW IQSGDTPDNF WNVDHQFLQQ QLMNDIM |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G49620.1 | 1e-83 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW20493 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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