PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW20562

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

ARR-B

Protein Properties

Length: 245aa MW: 27926.8 Da PI: 6.5259

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20562	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	72.1	8.2e-23	195	244	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kp+++Wt++LH+ F+ a+++L G +kA+Pk+ile+m+v++Lt+e+v+SHLQ OIW20562 195 KPKMVWTTQLHNLFMTAIKKL-GYDKAVPKSILEVMNVPSLTRENVASHLQ 244 79*****************.*************************** PP
2	Myb_DNA-binding	29.7	1.5e-09	197	244	1	45
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 ++ WTt+++ l+ a+k+lG + +k+I + m+ +t++++ s++q OIW20562 197 KMVWTTQLHNLFMTAIKKLGYDkaVPKSILEVMNvPSLTRENVASHLQ 244 678********************************************9 PP
3	Response_reg	51.3	6.4e-18	10	119	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE.STTTHHHHHHHHHTTE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvt.ahgeeedalealkaGa 94 vl+vd++++ + ++ ++l++ +y +v +a + + al++l+e + Dl+++ + m+g++G+e+ + i+ e klp+i+++ + g++e + + + OIW20562 10 VLVVDEDDSSLTIVSNILSSWDY-KVLTANSVDNALKTLREYEgfLDLVITEVHMSGIKGYEFQQCIKDEF-KLPVIMMStDAGKKEVTSNSEENKE 104 89*******************.**************99***********************99.9999999967777888888889889 PP SEEEESS--HHHHHH CS Response_reg 95 kdflsKpfdpeelvk 109 +l Kp+ ++l + OIW20562 105 ALHLLKPICADDLKD 119 999999998888865 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MANEKVTLTV LVVDEDDSSL TIVSNILSSW DYKVLTANSV DNALKTLREY EGFLDLVITE 60 VHMSGIKGYE FQQCIKDEFK LPVIMMSTDA GKKEVTSNSE ENKEALHLLK PICADDLKDV 120 WKYAMAAKEK KPVIQNESSS EEESSAEKII NQDIDSSAPS TVTHEKKRKR KYNRRRSIEM 180 NNENHSEDSY RVQKKPKMVW TTQLHNLFMT AIKKLGYDKA VPKSILEVMN VPSLTRENVA 240 SHLQV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	171	KKRKRK
2	166	197	KKRKRKYNRRRSIEMNNENHSEDSYRVQKKPK
3	167	198	KKRKRKYNRRRSIEMNNENHSEDSYRVQKKPK
4	168	199	KKRKRKYNRRRSIEMNNENHSEDSYRVQKKPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	8e-33	ARR-B family protein

Link Out ? help Back to Top
Ensembl	OIW20562