PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW20573

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 478aa MW: 52986.7 Da PI: 9.0626

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20573	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	9e-05	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F r nL+ H r H OIW20573 83 FVCEICLKGFQRDQNLQLHRRGH 105 89*******************88 PP
2	zf-C2H2	13.5	0.00022	159	181	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ OIW20573 159 WKCEKCSKRYAVQSDWKAHSKTC 181 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MDDGEISYGF THQNTTGASS NTPALKRKRN LPGNPGMFFS FIVAYSYILS FLIFSTFCLI 60 IEHYPEAEVI ALSPKTLMAT NRFVCEICLK GFQRDQNLQL HRRGHNLPWK LKQRTSKEVK 120 KRVYVCPEKT CVHNHPSRAL GDLTGIKKHF CRKHGEKKWK CEKCSKRYAV QSDWKAHSKT 180 CGTKEYKCDC GTIFSRRDSF ITHRAFCDAL AEETAKVNAG SNMAYSLMQT SIRPNMATRF 240 SSIFKPNSNT EEPSDQTYRE LSLWNMGQTS QAHETLVNGN LHEIHPLGSA TLYSGGNPLV 300 VSCSNPPPSN YQLKWVFDNK VSSNGNQDLT STTTSLPLVN NFKDTTNNLV SVPSLYSSQH 360 QPNQTTSANM SATALLQKAA QIGATSSTEP SFFGSFGLKC SNGQGQDGNK FCGMYGSSSA 420 LTSLGSEQDN SLSYLSHMPP TKRRHVQNEE GAAGGQTRDF LGVAMQTICH PSSINGWI

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MDDGEISYGF THQNTTGASS NTPALKRKRN LPGNPGMFFS FIVAYSYILS FLIFSTFCLI  60
IEHYPEAEVI ALSPKTLMAT NRFVCEICLK GFQRDQNLQL HRRGHNLPWK LKQRTSKEVK  120
KRVYVCPEKT CVHNHPSRAL GDLTGIKKHF CRKHGEKKWK CEKCSKRYAV QSDWKAHSKT  180
CGTKEYKCDC GTIFSRRDSF ITHRAFCDAL AEETAKVNAG SNMAYSLMQT SIRPNMATRF  240
SSIFKPNSNT EEPSDQTYRE LSLWNMGQTS QAHETLVNGN LHEIHPLGSA TLYSGGNPLV  300
VSCSNPPPSN YQLKWVFDNK VSSNGNQDLT STTTSLPLVN NFKDTTNNLV SVPSLYSSQH  360
QPNQTTSANM SATALLQKAA QIGATSSTEP SFFGSFGLKC SNGQGQDGNK FCGMYGSSSA  420
LTSLGSEQDN SLSYLSHMPP TKRRHVQNEE GAAGGQTRDF LGVAMQTICH PSSINGWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-140	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW20573