PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW20722
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 211aa    MW: 24462.4 Da    PI: 8.4837
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW20722genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF45.97e-151151343
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
              i ++s+r+ t+ kR+  ++KK +E+S+LC+++++ i++s +
  OIW20722 11 IISESKRKATYKKRKSCLIKKTNEISTLCGIQACAIVYSDD 51
              67899**********************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MTRKKVNLEY IISESKRKAT YKKRKSCLIK KTNEISTLCG IQACAIVYSD DEPHPEVWPS  60
HFDVQRVLHK FEALPELEKD QKMLDQETFL KKRIIKAREH LMKQRNQNMK KKMDLLMFKC  120
LSSGTIVDNN IDVSCFLWVI DETLKEVELK KTRDQSQSGI HVAENGSKSL SGEKEPVDAH  180
VQLMMPSVDA MLKQDWLMDS VHAVGNEMLH F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVNLEYIISESKRKATYKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-36M-type_MADS family protein