PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW20857

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 228aa MW: 24421.3 Da PI: 8.3967

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20857	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.0001	75	97	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+ksF++ L H +H OIW20857 75 FKCSVCDKSFPSYQALGGHKASH 97 89**********99999998887 PP
2	zf-C2H2	14.6	9.2e-05	130	152	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ksF++ L H r+H OIW20857 130 HECSICHKSFPTGQALGGHKRRH 152 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MNSPTTATPS FTFDTKNHHS LNESWTKGKR SKRSRLDNHH PSCTEEEYLA YCLIMLASGG 60 ATTPPPLVSS AKPNFKCSVC DKSFPSYQAL GGHKASHRKI SGGESSSSAA TTNSANTTAI 120 AMSNGGGKVH ECSICHKSFP TGQALGGHKR RHYEGGNGGN NSPTTITASE GVGSTHTVTN 180 HRDFDLNIPA LPEFSISTMV GEDEVESPLP LMKKPRLFMI PNIEIPQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	2e-63	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW20857