PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW20907

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 397aa MW: 43408.1 Da PI: 5.32

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20907	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.4	6e-08	33	76	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C++++++++ C + ++ lC++C +H + H++++ OIW20907 33 LLCERCNSQPAVVRCAEEKVSLCQNCDWLGHGSstssstHKRQT 76 57*****************************4488889998876 PP
2	CCT	58.9	1.8e-20	340	382	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R +a++RYkeK+k RkF+K++rY+sRK++A+ R RvKGrFvk OIW20907 340 RSNAVMRYKEKKKIRKFDKRVRYASRKERADVRRRVKGRFVKV 382 899**************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MVYCRSDAAC LCLSCDRNVH SANSLSKRHS RTLLCERCNS QPAVVRCAEE KVSLCQNCDW 60 LGHGSSTSSS THKRQTINCY SGCPSSEELS SIWSFILDIS SMSGSSCEQE LGLMSINENS 120 NTSSRVPPEN QNVTGSDQVN NLPGKDKSGV GASSKSESST ESPVPDHPAG PSNQCLPKFY 180 RPGTKCPSIC EDNMYPDFEM GEADINLENY DELFGMTLTH SEELFENGGF DSLFGIKDIS 240 AEDSDCLGAV VAESSVELVN AMQPACSNAE SADSILSTKT EPIICFTARQ APSNISFSGI 300 AGESNAGDYQ DCGASSMRLM GEPPWHSPFP ENSLHSASNR SNAVMRYKEK KKIRKFDKRV 360 RYASRKERAD VRRRVKGRFV KVGDAYDYDP LGPTRSY

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MVYCRSDAAC LCLSCDRNVH SANSLSKRHS RTLLCERCNS QPAVVRCAEE KVSLCQNCDW  60
LGHGSSTSSS THKRQTINCY SGCPSSEELS SIWSFILDIS SMSGSSCEQE LGLMSINENS  120
NTSSRVPPEN QNVTGSDQVN NLPGKDKSGV GASSKSESST ESPVPDHPAG PSNQCLPKFY  180
RPGTKCPSIC EDNMYPDFEM GEADINLENY DELFGMTLTH SEELFENGGF DSLFGIKDIS  240
AEDSDCLGAV VAESSVELVN AMQPACSNAE SADSILSTKT EPIICFTARQ APSNISFSGI  300
AGESNAGDYQ DCGASSMRLM GEPPWHSPFP ENSLHSASNR SNAVMRYKEK KKIRKFDKRV  360
RYASRKERAD VRRRVKGRFV KVGDAYDYDP LGPTRSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	1e-111	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIW20907