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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW20967 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 270aa MW: 30769.4 Da PI: 5.7378 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 55.8 | 7.5e-18 | 67 | 120 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k
OIW20967 67 KKRRLNIEQVKTLEKSFELGNKLEPERKMHLARALGLQPRQIAIWFQNRRARWK 120
4557899**********************************************9 PP
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| 2 | HD-ZIP_I/II | 131.5 | 3.2e-42 | 66 | 156 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekkrrl+ eqvk+LE+sFe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+yda+k++n++L++++++L++e+
OIW20967 66 EKKRRLNIEQVKTLEKSFELGNKLEPERKMHLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYDAMKSDNDALQAQNQKLQAEI 156
69**************************************************************************************987 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 270 aa Download sequence |
MLQTPHHDDH QPPPSLNSIL PTCTPQDYHG GPSFLGKRSM SFSGIELGEE VNAEEDFSDD 60 GSQVGEKKRR LNIEQVKTLE KSFELGNKLE PERKMHLARA LGLQPRQIAI WFQNRRARWK 120 TKQLEKDYDL LKRQYDAMKS DNDALQAQNQ KLQAEILALK SREPTESINL NKETEGSCSN 180 RSENSSEIKL DISRTQAIDS PLSPNLISRP LFPSSSTTTR PTSVTQFIQI ASRSDLQCQK 240 IDQVAKEESL SYMFCGMDDQ SGFWPWLEQQ |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 115 | 123 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G69780.1 | 1e-104 | HD-ZIP family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW20967 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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