PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21003

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 435aa MW: 48386.5 Da PI: 8.7466

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21003	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.1e-05	28	50	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F r nL+ H r H OIW21003 28 FVCEICLKGFQRDQNLQLHRRGH 50 89*******************88 PP
2	zf-C2H2	13.6	0.0002	104	126	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ OIW21003 104 WKCEKCSKRYAVQSDWKAHSKTC 126 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MNDGEISHDP EAEVIALSPK TLMATNRFVC EICLKGFQRD QNLQLHRRGH NLPWKLKQRT 60 SKEVRKRVYV CPEKTCVHNH PSRALGDLTG IKKHFCRKHG EKKWKCEKCS KRYAVQSDWK 120 AHSKTCGTRE YKCDCGTIFS RRDSFITHRA FCEALAEETA RVNAGSNINN SLGGNIGYNL 180 MQTSLLPSMA THISSFLKPI SNTEEPNIQT SRALSLWMGQ KSQAHETLVN DNLHETHQLG 240 CPISQGGTLY CSQNPFVSCS NPIPSNYQLN WVFDNKFSSN GNQYLTSTTT SLPLGNNIIK 300 DTTNQLVSVP SLYSSQHQSL QTTSTNMSAT ALLQKAAQIG ATSSTESSFL GNFGLKCRNG 360 EVQDVNKFCG MYGSSSLFTS LGSEEGNYAG DLSEMPLTKR RHIQSEESAA RGQTRDFLGV 420 GVQTICHPSS INRWI

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MNDGEISHDP EAEVIALSPK TLMATNRFVC EICLKGFQRD QNLQLHRRGH NLPWKLKQRT  60
SKEVRKRVYV CPEKTCVHNH PSRALGDLTG IKKHFCRKHG EKKWKCEKCS KRYAVQSDWK  120
AHSKTCGTRE YKCDCGTIFS RRDSFITHRA FCEALAEETA RVNAGSNINN SLGGNIGYNL  180
MQTSLLPSMA THISSFLKPI SNTEEPNIQT SRALSLWMGQ KSQAHETLVN DNLHETHQLG  240
CPISQGGTLY CSQNPFVSCS NPIPSNYQLN WVFDNKFSSN GNQYLTSTTT SLPLGNNIIK  300
DTTNQLVSVP SLYSSQHQSL QTTSTNMSAT ALLQKAAQIG ATSSTESSFL GNFGLKCRNG  360
EVQDVNKFCG MYGSSSLFTS LGSEEGNYAG DLSEMPLTKR RHIQSEESAA RGQTRDFLGV  420
GVQTICHPSS INRWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-123	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW21003