PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21024

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 187aa MW: 20917.7 Da PI: 6.2529

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21024	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	141.9	2e-44	11	109	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C +dC++apyfp e+++kfanvhk+FGasnv+kll++l +++reda++sl++eAear+rdPvyG+vgvi+ lq+q+++l++el+++++ OIW21024 11 PCAACKYLRRRCIPDCIFAPYFPPEERQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAFEAEARVRDPVYGCVGVITFLQRQVQRLQKELDVVNA 109 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MASSSSSYAS PCAACKYLRR RCIPDCIFAP YFPPEERQKF ANVHKIFGAS NVTKLLNELL 60 PHQREDAVNS LAFEAEARVR DPVYGCVGVI TFLQRQVQRL QKELDVVNAD LLRYASNEIS 120 PLPASLAIPP LTQVQQIHQG NQFGAKFRNE ESEFCRQPPM TYSFPYSLPW SDTSLEDINE 180 GGGGGNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	9e-62	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW21024